Cools Piet, Ho Erwin, Vranckx Katleen, Schelstraete Petra, Wurth Bettina, Franckx Hilde, Ieven Greet, Van Simaey Leen, Van Daele Sabine, Verhulst Stijn, De Baets Frans, Vaneechoutte Mario
Laboratory Bacteriology Research (LBR), Department of Microbiology, Immunology, and Clinical Chemistry, Faculty of Medicine and Health Sciences, Ghent University, De Pintelaan 185, 9000, Ghent, Belgium.
Cystic Fibrosis Centre, Antwerp University Hospital (AUH), Antwerp, Belgium.
BMC Microbiol. 2016 Jun 24;16(1):122. doi: 10.1186/s12866-016-0736-1.
Achromobacter xylosoxidans is increasingly being recognized as an emerging pathogen in cystic fibrosis. Recent severe infections with A. xylosoxidans in some of our cystic fibrosis (CF) patients led to a re-evaluation of the epidemiology of CF-associated A. xylosoxidans infections in two Belgian reference centres (Antwerp and Ghent). Several of these patients also stayed at the Rehabilitation Centre De Haan (RHC). In total, 59 A. xylosoxidans isolates from 31 patients (including 26 CF patients), collected between 2001 and 2014, were studied. We evaluated Matrix Assisted Laser Desorption Ionisation -Time of Flight mass spectrometry (MALDI-TOF) as an alternative for McRAPD typing.
Both typing approaches established the presence of a major cluster, comprising isolates, all from 21 CF patients, including from two patients sampled when staying at the RHC a decade ago. This major cluster was the same as the cluster established already a decade ago at the RHC. A minor cluster consisted of 13 isolates from miscellaneous origin. A further seven isolates, including one from a non-CF patient who had stayed recently at the RHC, were singletons.
Typing results of both methods were similar, indicating transmission of a single clone of A. xylosoxidans among several CF patients from at least two reference centres. Isolates of the same clone were already observed at the RHC, a decade ago. It is difficult to establish to what extent the RHC is the source of transmission, because the epidemic strain was already present when the first epidemiological study in the RHC was carried out. This study also documents the applicability of MALDI-TOF for typing of strains within the species A. xylosoxidans and the need to use the dynamic cutoff algorithm of the BioNumerics® software for correct clustering of the fingerprints.
木糖氧化无色杆菌越来越被认为是囊性纤维化中的一种新兴病原体。最近我们的一些囊性纤维化(CF)患者发生了严重的木糖氧化无色杆菌感染,这促使我们对比利时两个参考中心(安特卫普和根特)与CF相关的木糖氧化无色杆菌感染的流行病学进行重新评估。其中一些患者还曾在哈恩康复中心(RHC)停留。对2001年至2014年间从31名患者(包括26名CF患者)中分离出的59株木糖氧化无色杆菌进行了研究。我们评估了基质辅助激光解吸电离飞行时间质谱(MALDI-TOF)作为McRAPD分型的替代方法。
两种分型方法均确定存在一个主要聚类,包括所有来自21名CF患者的分离株,其中包括10年前在RHC停留时采样的两名患者的分离株。这个主要聚类与10年前在RHC确定的聚类相同。一个次要聚类由13株来源各异的分离株组成。另外7株分离株,包括1株来自最近在RHC停留过的非CF患者的分离株,为单株。
两种方法的分型结果相似,表明至少两个参考中心的数名CF患者中存在单一克隆的木糖氧化无色杆菌传播。10年前在RHC就已观察到相同克隆的分离株。很难确定RHC在多大程度上是传播源,因为在RHC进行首次流行病学研究时流行菌株就已存在。本研究还证明了MALDI-TOF在木糖氧化无色杆菌种内菌株分型中的适用性,以及使用BioNumerics®软件的动态截止算法对指纹进行正确聚类的必要性。