Kaushik Gaurav, Xia Yu, Yang Luobin, Thomas Michael A
Department of Biological Sciences, Idaho State University, Stop 8007, 921S 8th Ave, Pocatello, ID, 83209-8007, USA.
Department of Medical Pathology and Laboratory Medicine, University of California at Davis, Davis, CA, 95817, USA.
BMC Genomics. 2016 Jun 29;17 Suppl 3(Suppl 3):435. doi: 10.1186/s12864-016-2784-1.
A number of researchers have speculated that neurological disorders are mostly due to the interaction of common susceptibility genes with environmental, epigenetic and stochastic factors. Genetic factors such as mutations, insertions, deletions and copy number variations (CNVs) are responsible for only a small subset of cases, suggesting unknown environmental contaminants play a role in triggering neurological disorders like idiopathic autism. Psychoactive pharmaceuticals have been considered as potential environmental contaminants as they are detected in the drinking water at very low concentrations. Preliminary studies in our laboratory identified gene sets associated with neuronal systems and human neurological disorders that were significantly enriched after treating fish brains with psychoactive pharmaceuticals at environmental concentrations. These gene expression inductions were associated with changes in fish behavior. Here, we tested the hypothesis that similar treatments would alter in vitro gene expression associated with neurological disorders (including autism) in human neuronal cells. We differentiated and treated human SK-N-SH neuroblastoma cells with a mixture (fluoxetine, carbamazepine and venlafaxine) and valproate (used as a positive control to induce autism-associated profiles), followed by transcriptome analysis with RNA-Seq approach.
We found that psychoactive pharmaceuticals and valproate significantly altered neuronal gene sets associated with human neurological disorders (including autism-associated sets). Moreover, we observed that altered expression profiles in human cells were similar to gene expression profiles previously identified in fish brains.
Psychoactive pharmaceuticals at environmental concentrations altered in vitro gene expression profiles of neuronal growth, development and regulation. These expression patterns were associated with potential neurological disorders including autism, suggested psychoactive pharmaceuticals at environmental concentrations might mimic, aggravate, or induce neurological disorders.
许多研究人员推测,神经系统疾病主要是由于常见的易感基因与环境、表观遗传和随机因素相互作用所致。诸如突变、插入、缺失和拷贝数变异(CNV)等遗传因素仅导致一小部分病例,这表明未知的环境污染物在引发诸如特发性自闭症等神经系统疾病中起作用。精神活性药物因其在饮用水中以极低浓度被检测到,已被视为潜在的环境污染物。我们实验室的初步研究确定了与神经元系统和人类神经系统疾病相关的基因集,在用环境浓度的精神活性药物处理鱼脑后,这些基因集显著富集。这些基因表达诱导与鱼的行为变化有关。在此,我们检验了这样一个假设,即类似的处理会改变人类神经元细胞中与神经系统疾病(包括自闭症)相关的体外基因表达。我们用一种混合物(氟西汀、卡马西平和文拉法辛)和丙戊酸(用作诱导自闭症相关特征的阳性对照)对人SK-N-SH神经母细胞瘤细胞进行分化和处理,随后采用RNA-Seq方法进行转录组分析。
我们发现精神活性药物和丙戊酸显著改变了与人类神经系统疾病(包括自闭症相关基因集)相关的神经元基因集。此外,我们观察到人类细胞中改变的表达谱与先前在鱼脑中鉴定的基因表达谱相似。
环境浓度的精神活性药物改变了神经元生长、发育和调节的体外基因表达谱。这些表达模式与包括自闭症在内的潜在神经系统疾病相关,表明环境浓度的精神活性药物可能模拟、加重或诱发神经系统疾病。