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乙烯基丙酮酸水合酶催化反应的立体化学结果

Stereochemical Consequences of Vinylpyruvate Hydratase-Catalyzed Reactions.

作者信息

Johnson William H, Stack Tyler M M, Taylor Stephanie M, Burks Elizabeth A, Whitman Christian P

机构信息

Division of Chemical Biology and Medicinal Chemistry, College of Pharmacy, and ‡Department of Molecular Biosciences, University of Texas , Austin, Texas 78712, United States.

出版信息

Biochemistry. 2016 Jul 26;55(29):4055-64. doi: 10.1021/acs.biochem.6b00552. Epub 2016 Jul 12.

Abstract

A stereochemical analysis has been carried out on two vinylpyruvate hydratases (VPH), which convert 2-hydroxy-2,4-pentadienoate to 2-keto-4S-hydroxypentanoate in meta-fission pathways. Bacterial strains with this pathway can use aromatic compounds as sole sources of energy and carbon. The analysis was carried out using the 5-methyl and 5-chloro derivatives of 2-hydroxy-2,4-pentadienoate with the enzymes from Pseudomonas putida mt-2 (Pp) and Leptothrix cholodnii SP-6 (Lc). In both organisms, VPH is in a complex with the preceding enzyme in the pathway, 4-oxalocrotonate decarboxylase (4-OD). In D2O, a deuteron is incorporated stereospecifically at the C-3 and C-5 positions of product by both Pp and Lc enzymes. Accordingly, the complexes generate (3S,5S)-3,5-[di-D]-2-keto-4S-hydroxyhexanoate and (3S,5R)-3,5-[di-D]-2-keto-4R-hydroxy-5-chloropentanoate (4R and 5R due to a priority numbering change). The substitution at C-5 (CH3 or Cl) or the source of the enzyme (Pp or Lc) does not change the stereochemical outcome. One mechanism that can account for the results is the ketonization of the 5-substituted dienol to the α,β-unsaturated ketone (placing a deuteron at C-5 in D2O), followed by the conjugate addition of water (placing a deuteron at C-3). The stereochemical outcome for VPH (from Pp and Lc) is the same as that reported for a related enzyme, 2-oxo-hept-4-ene-1,7-dioate hydratase, from Escherichia coli C. The combined observations suggest similar mechanisms for these three enzymes that could possibly be common to this group of enzymes.

摘要

对两种乙烯基丙酮酸水合酶(VPH)进行了立体化学分析,这两种酶在间位裂解途径中将2-羟基-2,4-戊二烯酸转化为2-酮-4S-羟基戊酸。具有该途径的细菌菌株可以利用芳香族化合物作为唯一的能量和碳源。使用2-羟基-2,4-戊二烯酸的5-甲基和5-氯衍生物与来自恶臭假单胞菌mt-2(Pp)和嗜胆菌属SP-6(Lc)的酶进行了分析。在这两种生物体中,VPH与该途径中的前一种酶4-草酰巴豆酸脱羧酶(4-OD)形成复合物。在D2O中,Pp和Lc酶均将氘核立体定向地掺入产物的C-3和C-5位。因此,复合物生成(3S,5S)-3,5-[二-D]-2-酮-4S-羟基己酸和(3S,5R)-3,5-[二-D]-2-酮-4R-羟基-5-氯戊酸(由于优先级编号变化,为4R和5R)。C-5处的取代基(CH3或Cl)或酶的来源(Pp或Lc)不会改变立体化学结果。一种可以解释这些结果的机制是5-取代二烯醇酮化为α,β-不饱和酮(在D2O中将氘核置于C-5),随后水进行共轭加成(将氘核置于C-3)。VPH(来自Pp和Lc)的立体化学结果与来自大肠杆菌C的相关酶2-氧代-庚-4-烯-1,7-二酸水合酶所报道的结果相同。综合观察结果表明,这三种酶可能具有相似的机制,这可能是这一类酶所共有的。

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Stereochemical Consequences of Vinylpyruvate Hydratase-Catalyzed Reactions.乙烯基丙酮酸水合酶催化反应的立体化学结果
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