Vinnakota Janaki Manoja, Gummadi Sathyanarayana N
Applied and Industrial Microbiology Lab, Bhupat and Jyoti Mehta School of Biosciences, Department of Biotechnology, IIT Madras, Chennai 600036, India.
Gene. 2016 Oct 15;591(2):433-41. doi: 10.1016/j.gene.2016.06.050. Epub 2016 Jun 27.
Human phospholipid scramblases (hPLSCRs) are a group of transmembrane ATP independent lipid transporters mediating bi-directional transport of phospholipids. There are four homologues hPLSCR1-hPLSCR4 and hPLSCR1 is the extensively studied homologue among them. hPLSCR4 shares 48% homology with hPLSCR1 and mediates scrambling of PLs similar to hPLSCR1 in Ca(2+) dependent manner. Transcriptional regulation helps in better understanding of the function and the expression of a protein. Till date there are no reports suggesting the transcriptional regulation of hPLSCR4. In this study, we identified Snail to be a potent regulator of hPLSCR4. ConSite tool predicted the presence of a putative Snail binding site with a consensus sequence of (-1521)CAGGTG(-1516) on hPLSCR4 promoter. Luciferase assays depicted a dose dependent decrease in hPLSCR4 promoter activity with an increase in amount of Snail. Deletion analysis revealed that the region from -1380 to -2100 to be the regulatory region of hPLSCR4. Knock down studies further confirmed Snail mediated downregulation of hPLSCR4, as the mRNA and the protein levels of hPLSCR4 considerably increased under knock down conditions. The in vivo interaction of Snail with hPLSCR4 promoter was further confirmed by ChIP assay. This is the first report on the transcriptional regulation of hPLSCR4, where Snail was shown to downregulate the expression of hPLSCR4.
人类磷脂翻转酶(hPLSCRs)是一组不依赖ATP的跨膜脂质转运蛋白,介导磷脂的双向运输。有四个同源物hPLSCR1 - hPLSCR4,其中hPLSCR1是研究广泛的同源物。hPLSCR4与hPLSCR1有48%的同源性,并以钙依赖的方式介导与hPLSCR1类似的磷脂翻转。转录调控有助于更好地理解蛋白质的功能和表达。迄今为止,尚无关于hPLSCR4转录调控的报道。在本研究中,我们确定Snail是hPLSCR4的有效调节因子。ConSite工具预测在hPLSCR4启动子上存在一个推定的Snail结合位点,其共有序列为(-1521)CAGGTG(-1516)。荧光素酶测定显示,随着Snail量的增加,hPLSCR4启动子活性呈剂量依赖性降低。缺失分析表明,-1380至-2100区域是hPLSCR4的调控区域。敲低研究进一步证实了Snail介导的hPLSCR4下调,因为在敲低条件下hPLSCR4的mRNA和蛋白质水平显著增加。染色质免疫沉淀(ChIP)分析进一步证实了Snail与hPLSCR4启动子在体内的相互作用。这是关于hPLSCR4转录调控的首次报道,其中显示Snail下调hPLSCR4的表达。