Gupta Kartik, Pilli Vijaya Satish Sekhar, Aradhyam Gopala Krishna
Department of Biotechnology, Bhupat & Jyoti Mehta School of Biosciences, Indian Institute of Technology Madras, Chennai, 600036, India.
BMC Dev Biol. 2016 Oct 28;16(1):39. doi: 10.1186/s12861-016-0141-x.
Establishment of the left-right axis is important for positioning organs asymmetrically in the developing vertebrate-embryo. A number of factors like maternally deposited molecules have emerged essential in initiating the specification of the axis; the downstream events, however, are regulated by signal-transduction and gene-expression changes identifying which remains a crucial challenge. The EGF-CFC family member Cryptic, that functions as a co-receptor for some TGF-beta ligands, is developmentally expressed in higher mammals and mutations in the gene cause loss or change in left-right axis asymmetry. Despite the strong phenotype, no transcriptional-regulator of this gene is known till date.
Using promoter-analyses tools, we found strong evidence that the developmentally essential transcription factor Snail binds to the human Cryptic-promoter. We cloned the promoter-region of human Cryptic in a reporter gene and observed decreased Cryptic-promoter activation upon increasing Snail expression. Further, the expression of Cryptic is down-regulated upon exogenous Snail expression, validating the reporter assays and the previously identified role of Snail as a transcriptional repressor. Finally, we demonstrate using gel-shift assay that Snail in nuclear extract of PANC1 cells interacts with the promoter-construct bearing putative Snail binding sites and confirm this finding using chromatin immunoprecipitation assay.
Snail represses the expression of human Cryptic and therefore, might affect the signaling via Nodal that has previously been demonstrated to specify the left-right axis using the EGF-CFC co-receptors.
左右轴的建立对于发育中的脊椎动物胚胎中器官的不对称定位至关重要。许多因素,如母体沉积的分子,已被证明在启动轴的特化过程中必不可少;然而,下游事件是由信号转导和基因表达变化调控的,确定这些变化仍然是一个关键挑战。表皮生长因子-CFC家族成员Cryptic作为某些转化生长因子-β配体的共受体发挥作用,在高等哺乳动物中呈发育性表达,该基因的突变会导致左右轴不对称性的丧失或改变。尽管有强烈的表型,但迄今为止尚未发现该基因的转录调节因子。
使用启动子分析工具,我们发现了有力证据,表明发育必需的转录因子Snail与人类Cryptic启动子结合。我们将人类Cryptic的启动子区域克隆到一个报告基因中,并观察到随着Snail表达的增加,Cryptic启动子的激活减少。此外,外源性Snail表达会下调Cryptic的表达,验证了报告基因检测以及先前确定的Snail作为转录抑制因子的作用。最后,我们使用凝胶迁移试验证明,PANC1细胞核提取物中的Snail与带有假定Snail结合位点的启动子构建体相互作用,并使用染色质免疫沉淀试验证实了这一发现。
Snail抑制人类Cryptic的表达,因此可能会影响通过Nodal的信号传导,此前已证明Nodal使用表皮生长因子-CFC共受体来确定左右轴。