Roberts Angela, Austin William, Evans Katharine, Bird Clare, Schweizer Magali, Darling Kate
School of Geography and Geosciences, University of St Andrews, St Andrews, Fife, Scotland, KY16 9AL, United Kingdom.
Scottish Association for Marine Science, Scottish Marine Institute, Oban, Argyll, Scotland, PA37 1QA, United Kingdom.
PLoS One. 2016 Jul 7;11(7):e0158754. doi: 10.1371/journal.pone.0158754. eCollection 2016.
A robust and consistent taxonomy underpins the use of fossil material in palaeoenvironmental research and long-term assessment of biodiversity. This study presents a new integrated taxonomic protocol for benthic foraminifera by unequivocally reconciling the traditional taxonomic name to a specific genetic type. To implement this protocol, a fragment of the small subunit ribosomal RNA (SSU rRNA) gene is used in combination with 16 quantitative morphometric variables to fully characterise the benthic foraminiferal species concept of Elphidium williamsoni Haynes, 1973. A combination of live contemporary topotypic specimens, original type specimens and specimens of genetic outliers were utilised in this study. Through a series of multivariate statistical tests we illustrate that genetically characterised topotype specimens are morphologically congruent with both the holotype and paratype specimens of E. williamsoni Haynes, 1973. We present the first clear link between morphologically characterised type material and the unique SSU rRNA genetic type of E. williamsoni. This example provides a standard framework for the benthic foraminifera which bridges the current discontinuity between molecular and morphological lines of evidence, allowing integration with the traditional Linnaean roots of nomenclature to offer a new prospect for taxonomic stability.
一个强大且一致的分类法是古环境研究中使用化石材料以及生物多样性长期评估的基础。本研究通过明确地将传统分类名称与特定基因类型进行协调,提出了一种用于底栖有孔虫的新的综合分类方案。为了实施该方案,小亚基核糖体RNA(SSU rRNA)基因的一个片段与16个定量形态测量变量结合使用,以全面表征1973年Haynes命名的威廉姆森艾氏有孔虫(Elphidium williamsoni)的底栖有孔虫物种概念。本研究使用了当代活体地模标本、原始模式标本和基因异常标本的组合。通过一系列多变量统计测试,我们表明经基因特征化的地模标本在形态上与1973年Haynes命名的威廉姆森艾氏有孔虫的正模标本和副模标本一致。我们展示了形态特征化的模式材料与威廉姆森艾氏有孔虫独特的SSU rRNA基因类型之间的第一个明确联系。这个例子为底栖有孔虫提供了一个标准框架,弥合了当前分子和形态证据之间的脱节,允许与传统的林奈命名法根源相结合,为分类稳定性提供了新的前景。