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对适应性辐射哺乳动物模型中捕食行为的选择的基因组响应。

Genomic Response to Selection for Predatory Behavior in a Mammalian Model of Adaptive Radiation.

机构信息

Institute of Environmental Sciences, Jagiellonian University, Kraków, Poland Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology, Barcelona, Spain Universitat Pompeu Fabra (UPF), Barcelona, Spain

Institute of Environmental Sciences, Jagiellonian University, Kraków, Poland.

出版信息

Mol Biol Evol. 2016 Sep;33(9):2429-40. doi: 10.1093/molbev/msw121. Epub 2016 Jul 8.

Abstract

If genetic architectures of various quantitative traits are similar, as studies on model organisms suggest, comparable selection pressures should produce similar molecular patterns for various traits. To test this prediction, we used a laboratory model of vertebrate adaptive radiation to investigate the genetic basis of the response to selection for predatory behavior and compare it with evolution of aerobic capacity reported in an earlier work. After 13 generations of selection, the proportion of bank voles (Myodes [=Clethrionomys] glareolus) showing predatory behavior was five times higher in selected lines than in controls. We analyzed the hippocampus and liver transcriptomes and found repeatable changes in allele frequencies and gene expression. Genes with the largest differences between predatory and control lines are associated with hunger, aggression, biological rhythms, and functioning of the nervous system. Evolution of predatory behavior could be meaningfully compared with evolution of high aerobic capacity, because the experiments and analyses were performed in the same methodological framework. The number of genes that changed expression was much smaller in predatory lines, and allele frequencies changed repeatably in predatory but not in aerobic lines. This suggests that more variants of smaller effects underlie variation in aerobic performance, whereas fewer variants of larger effects underlie variation in predatory behavior. Our results thus contradict the view that comparable selection pressures for different quantitative traits produce similar molecular patterns. Therefore, to gain knowledge about molecular-level response to selection for complex traits, we need to investigate not only multiple replicate populations but also multiple quantitative traits.

摘要

如果各种数量性状的遗传结构相似,正如模型生物的研究表明的那样,那么类似的选择压力应该会为各种性状产生类似的分子模式。为了检验这一预测,我们使用了脊椎动物适应性辐射的实验室模型,研究了捕食行为选择的遗传基础,并将其与早期研究中报道的有氧能力进化进行了比较。经过 13 代的选择,在选择系中表现出捕食行为的田鼠(Myodes[=Clethrionomys] glareolus)的比例比对照组高五倍。我们分析了海马体和肝脏转录组,发现等位基因频率和基因表达有可重复的变化。在捕食和对照系之间差异最大的基因与饥饿、攻击性、生物节律和神经系统功能有关。捕食行为的进化可以与高有氧能力的进化进行有意义的比较,因为实验和分析是在相同的方法框架中进行的。在捕食系中,表达发生变化的基因数量要少得多,而在捕食系中重复发生的等位基因频率变化在有氧系中则没有发生。这表明,有氧表现的变异更多地是由较小效应的多个变体引起的,而捕食行为的变异则更多地是由较大效应的少数变体引起的。因此,我们的研究结果与为不同数量性状提供类似选择压力会产生类似分子模式的观点相矛盾。因此,为了了解对复杂性状进行选择的分子水平响应,我们不仅需要研究多个重复种群,还需要研究多个数量性状。

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