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登革病毒包膜蛋白结构域3在高温下异常的可逆寡聚化及其通过点突变的消除

Unusual Reversible Oligomerization of Unfolded Dengue Envelope Protein Domain 3 at High Temperatures and Its Abolition by a Point Mutation.

作者信息

Saotome Tomonori, Nakamura Shigeyoshi, Islam Mohammad M, Nakazawa Akiko, Dellarole Mariano, Arisaka Fumio, Kidokoro Shun-Ichi, Kuroda Yutaka

机构信息

Department of Biotechnology and Life Science, Tokyo University of Agriculture and Technology , Tokyo 184-8588, Japan.

Department of Bioengineering, Nagaoka University of Technology , Niigata 940-2188, Japan.

出版信息

Biochemistry. 2016 Aug 16;55(32):4469-75. doi: 10.1021/acs.biochem.6b00431. Epub 2016 Aug 4.

Abstract

We report differential scanning calorimetry (DSC) experiments between 10 and 120 °C of Dengue 4 envelope protein domain 3 (DEN4 ED3), a small 107-residue monomeric globular protein domain. The thermal unfolding of DEN4 ED3 was fully reversible and exhibited two peculiar endothermic peaks. AUC (analytical ultracentrifugation) experiments at 25 °C indicated that DEN4 ED3 was monomeric. Detailed thermodynamic analysis indicated that the two endothermic peaks separated with an increasing protein concentration, and global fitting of the DSC curves strongly suggested the presence of unfolded tetramers at temperatures around 80-90 °C, which dissociated to unfolded monomers at even higher temperatures. To further characterize this rare thermal unfolding process, we designed and constructed a DEN4 ED3 variant that would unfold according to a two-state model, typical of globular proteins. We thus substituted Val 380, the most buried residue at the dimeric interface in the protein crystal, with less hydrophobic amino acids (Ala, Ser, Thr, Asn, and Lys). All variants showed a single heat absorption peak, typical of small globular proteins. In particular, the DSC thermogram of DEN4 V380K indicated a two-state reversible thermal unfolding independent of protein concentration, indicating that the high-temperature oligomeric state was successfully abolished by a single mutation. These observations confirmed the standard view that small monomeric globular proteins undergo a two-state unfolding. However, the reversible formation of unfolded oligomers at high temperatures is a truly new phenomenon, which was fully inhibited by an accurately designed single mutation.

摘要

我们报告了登革热4型包膜蛋白结构域3(DEN4 ED3)在10至120°C之间的差示扫描量热法(DSC)实验,DEN4 ED3是一个由107个残基组成的小单体球状蛋白结构域。DEN4 ED3的热解折叠是完全可逆的,并表现出两个独特的吸热峰。25°C下的分析超速离心(AUC)实验表明DEN4 ED3是单体。详细的热力学分析表明,随着蛋白质浓度的增加,两个吸热峰分开,DSC曲线的全局拟合强烈表明在80 - 90°C左右的温度下存在未折叠的四聚体,在更高温度下会解离为未折叠的单体。为了进一步表征这种罕见的热解折叠过程,我们设计并构建了一个根据典型球状蛋白的两态模型进行解折叠的DEN4 ED3变体。因此,我们用疏水性较小的氨基酸(丙氨酸、丝氨酸、苏氨酸、天冬酰胺和赖氨酸)取代了蛋白质晶体中位于二聚体界面处最隐蔽的残基缬氨酸380。所有变体都显示出一个单一的吸热峰,这是小球状蛋白的典型特征。特别是,DEN4 V380K的DSC热谱图表明其热解折叠是两态可逆的,且与蛋白质浓度无关,这表明通过单个突变成功消除了高温寡聚状态。这些观察结果证实了小分子单体球状蛋白经历两态解折叠的标准观点。然而,高温下未折叠寡聚体的可逆形成是一个全新的现象,通过精确设计的单个突变可完全抑制这一现象。

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