Department of Biological Sciences, Institute for Advanced Studies in Basic Sciences (IASBS), Zanjan 45137-66731, Iran.
Soft Matter. 2016 Aug 21;12(31):6557-65. doi: 10.1039/c6sm00288a. Epub 2016 Jul 20.
Finding the conditions for destabilizing actin-lysozyme complexes is of biomedical importance in preventing infections in cystic fibrosis. In this manuscript, the effects of different charge-mutants of lysozyme and salt concentration on the stability of actin-lysozyme complexes are studied using Langevin dynamics simulation. A coarse-grained model of F-actin is used in which both its twist and bending rigidities are considered. We observe that the attraction between F-actins is stronger in the presence of wild-type lysozymes relative to the mutated lysozymes of lower charges. By calculating the potential of mean force between F-actins, we conclude that the stability of actin-lysozyme complexes is decreased by reducing the charge of lysozyme mutants. The distributions of different lysozyme charge-mutants show that wild-type (+9e) lysozymes are mostly accumulated in the center of triangles formed by three adjacent F-actins, while lysozyme mutants of charges +7e and +5e occupy the bridging regions between F-actins. Low-charge mutants of lysozyme (+3e) distribute uniformly around F-actins. A rough estimate of the electrostatic energy for these different distributions proves that the distribution in which lysozymes reside in the center of triangles leads to more stable complexes. Also our results in the presence of a salt suggest that at physiological salt concentration of airway, F-actin complexes are not formed by charge-reduced mutants of lysozyme. The findings are interesting because if we can design charge-reduced lysozyme mutants with considerable antibacterial activity, they are not sequestered inside F-actin aggregates and can play their role as antibacterial agents against airway infection.
研究不稳定肌动蛋白-溶菌酶复合物的条件对于预防囊性纤维化中的感染具有重要的生物医学意义。在本文中,我们使用朗之万动力学模拟研究了不同电荷突变体的溶菌酶和盐浓度对肌动蛋白-溶菌酶复合物稳定性的影响。使用了一种粗粒化模型的 F-肌动蛋白,其中同时考虑了其扭转和弯曲刚度。我们观察到,在存在野生型溶菌酶的情况下,F-肌动蛋白之间的吸引力比电荷较低的突变体更强。通过计算 F-肌动蛋白之间的平均力势能,我们得出结论,降低溶菌酶突变体的电荷会降低肌动蛋白-溶菌酶复合物的稳定性。不同溶菌酶电荷突变体的分布表明,野生型(+9e)溶菌酶主要积聚在三个相邻 F-肌动蛋白形成的三角形的中心,而电荷为+7e 和+5e 的溶菌酶突变体占据 F-肌动蛋白之间的桥接区域。电荷为+3e 的低电荷突变体的溶菌酶在 F-肌动蛋白周围均匀分布。对这些不同分布的静电能进行粗略估计证明,溶菌酶位于三角形中心的分布导致更稳定的复合物。此外,我们在存在盐的情况下的结果表明,在气道的生理盐浓度下,电荷降低的溶菌酶突变体不会形成 F-肌动蛋白复合物。这些发现很有趣,因为如果我们能够设计出具有相当抗菌活性的电荷降低的溶菌酶突变体,它们不会被隔离在 F-肌动蛋白聚集体内部,并且可以发挥其作为针对气道感染的抗菌剂的作用。