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肌动蛋白折返聚合中全局排斥与局部吸引之间的静电平衡

Electrostatic balance between global repulsion and local attraction in reentrant polymerization of actin.

作者信息

Ohnuki Jun, Yodogawa Akira, Takano Mitsunori

机构信息

Department of Pure and Applied Physics, Waseda University, Tokyo, 169-8555, Japan.

Department of Advanced Science and Engineering, Waseda University, Tokyo, 169-8555, Japan.

出版信息

Cytoskeleton (Hoboken). 2017 Dec;74(12):504-511. doi: 10.1002/cm.21391. Epub 2017 Aug 31.

DOI:10.1002/cm.21391
PMID:28768064
Abstract

Actin polymerization depends on the salt concentration, exhibiting a reentrant behavior: the polymerization is promoted by increasing KCl concentration up to 100 mM, and then depressed by further increase above 100 mM. We here investigated the physical mechanism of this reentrant behavior by calculating the polymerization energy, defined by the electrostatic energy change upon binding of an actin subunit to a filament, using an implicit solvent model based on the Poisson-Boltzmann (PB) equation. We found that the polymerization energy as a function of the salt concentration shows a non-monotonic reentrant-like behavior, with the minimum at about 100 mM (1:1 salt). By separately examining the salt concentration effect on the global electrostatic repulsion between the like-charged subunits and that on the local electrostatic attraction between the inter-subunit ionic-bond-forming residues in the filament, we clarified that the reentrant behavior is caused by the change in the balance between the two opposing electrostatic interactions. Our study showed that the non-specific nature of counterions, as described in the mean-field theory, plays an important role in the actin polymerization. We also discussed the endothermic nature of the actin polymerization and mentioned the effect of ATP hydrolysis on the G-F transformation, indicating that the electrostatic interaction is widely and intricately involved in the actin dynamics.

摘要

肌动蛋白聚合作用取决于盐浓度,呈现出折返行为:在氯化钾浓度增加至100 mM之前,聚合作用会增强,而在超过100 mM后进一步增加则会受到抑制。我们在此通过计算聚合能来研究这种折返行为的物理机制,聚合能由肌动蛋白亚基与细丝结合时的静电能变化定义,使用基于泊松 - 玻尔兹曼(PB)方程的隐式溶剂模型。我们发现,作为盐浓度函数的聚合能呈现出非单调的类似折返行为,在约100 mM(1:1盐)时达到最小值。通过分别研究盐浓度对带相同电荷亚基之间全局静电排斥的影响以及对细丝中亚基间离子键形成残基之间局部静电吸引的影响,我们阐明了折返行为是由两种相反静电相互作用之间平衡的变化引起的。我们的研究表明,如平均场理论中所述的抗衡离子的非特异性性质在肌动蛋白聚合中起重要作用。我们还讨论了肌动蛋白聚合的吸热性质,并提及了ATP水解对G - F转变的影响,表明静电相互作用广泛且复杂地参与了肌动蛋白动力学。

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My various thoughts on actin.我对肌动蛋白的种种思考。
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