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拟南芥SR45剪接因子是糖信号的负调控因子,可调节SNF1相关蛋白激酶1的稳定性。

The Arabidopsis SR45 Splicing Factor, a Negative Regulator of Sugar Signaling, Modulates SNF1-Related Protein Kinase 1 Stability.

作者信息

Carvalho Raquel F, Szakonyi Dóra, Simpson Craig G, Barbosa Inês C R, Brown John W S, Baena-González Elena, Duque Paula

机构信息

Instituto Gulbenkian de Ciência, 2780-156 Oeiras, Portugal.

The James Hutton Institute, Invergowrie, Dundee DD2 5DA, Scotland, United Kingdom.

出版信息

Plant Cell. 2016 Aug;28(8):1910-25. doi: 10.1105/tpc.16.00301. Epub 2016 Jul 19.

DOI:10.1105/tpc.16.00301
PMID:27436712
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5006706/
Abstract

The ability to sense and respond to sugar signals allows plants to cope with environmental and metabolic changes by adjusting growth and development accordingly. We previously reported that the SR45 splicing factor negatively regulates glucose signaling during early seedling development in Arabidopsis thaliana Here, we show that under glucose-fed conditions, the Arabidopsis sr45-1 loss-of-function mutant contains higher amounts of the energy-sensing SNF1-Related Protein Kinase 1 (SnRK1) despite unaffected SnRK1 transcript levels. In agreement, marker genes for SnRK1 activity are upregulated in sr45-1 plants, and the glucose hypersensitivity of sr45-1 is attenuated by disruption of the SnRK1 gene. Using a high-resolution RT-PCR panel, we found that the sr45-1 mutation broadly targets alternative splicing in vivo, including that of the SR45 pre-mRNA itself. Importantly, the enhanced SnRK1 levels in sr45-1 are suppressed by a proteasome inhibitor, indicating that SR45 promotes targeting of the SnRK1 protein for proteasomal destruction. Finally, we demonstrate that SR45 regulates alternative splicing of the Arabidopsis 5PTase13 gene, which encodes an inositol polyphosphate 5-phosphatase previously shown to interact with and regulate the stability of SnRK1 in vitro, thus providing a mechanistic link between SR45 function and the modulation of degradation of the SnRK1 energy sensor in response to sugars.

摘要

感知并响应糖信号的能力使植物能够通过相应地调整生长和发育来应对环境和代谢变化。我们之前报道过,SR45剪接因子在拟南芥幼苗早期发育过程中对葡萄糖信号传导起负调控作用。在此,我们表明,在葡萄糖喂养条件下,拟南芥sr45 - 1功能缺失突变体中能量感应的SNF1相关蛋白激酶1(SnRK1)含量更高,尽管SnRK1转录水平未受影响。与此一致的是,sr45 - 1植株中SnRK1活性的标记基因上调,并且SnRK1基因的破坏减弱了sr45 - 1对葡萄糖的超敏感性。使用高分辨率RT - PCR分析,我们发现sr45 - 1突变在体内广泛靶向可变剪接,包括SR45前体mRNA本身的可变剪接。重要的是,蛋白酶体抑制剂抑制了sr45 - 1中增强的SnRK1水平,表明SR45促进SnRK1蛋白被蛋白酶体降解。最后,我们证明SR45调节拟南芥5PTase13基因的可变剪接,该基因编码一种肌醇多磷酸5 - 磷酸酶,先前已证明其在体外与SnRK1相互作用并调节其稳定性,从而在SR45功能与响应糖对SnRK1能量传感器降解的调节之间提供了一种机制联系。

相似文献

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The Arabidopsis SR45 Splicing Factor, a Negative Regulator of Sugar Signaling, Modulates SNF1-Related Protein Kinase 1 Stability.拟南芥SR45剪接因子是糖信号的负调控因子,可调节SNF1相关蛋白激酶1的稳定性。
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本文引用的文献

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Dynamic Distribution and Interaction of the Arabidopsis SRSF1 Subfamily Splicing Factors.拟南芥SRSF1亚家族剪接因子的动态分布与相互作用
Plant Physiol. 2016 Feb;170(2):1000-13. doi: 10.1104/pp.15.01338. Epub 2015 Dec 23.
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SUMOylation represses SnRK1 signaling in Arabidopsis.SUMO化修饰抑制拟南芥中的SnRK1信号传导。
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Transcriptome-Wide Identification of RNA Targets of Arabidopsis SERINE/ARGININE-RICH45 Uncovers the Unexpected Roles of This RNA Binding Protein in RNA Processing.拟南芥富含丝氨酸/精氨酸蛋白45的RNA靶标的全转录组鉴定揭示了这种RNA结合蛋白在RNA加工中的意外作用。
Plant Cell. 2015 Dec;27(12):3294-308. doi: 10.1105/tpc.15.00641. Epub 2015 Nov 24.
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SnRK1-triggered switch of bZIP63 dimerization mediates the low-energy response in plants.SnRK1触发的bZIP63二聚化开关介导植物的低能量响应。
Elife. 2015 Aug 11;4:e05828. doi: 10.7554/eLife.05828.
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Unmasking alternative splicing inside protein-coding exons defines exitrons and their role in proteome plasticity.揭示蛋白质编码外显子内部的可变剪接定义了外显子内终止子及其在蛋白质组可塑性中的作用。
Genome Res. 2015 Jul;25(7):995-1007. doi: 10.1101/gr.186585.114. Epub 2015 May 1.
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Phosphothreonine 218 is required for the function of SR45.1 in regulating flower petal development in Arabidopsis.磷酸苏氨酸218是SR45.1在拟南芥花瓣发育调控中发挥功能所必需的。
Plant Signal Behav. 2014;9(7):e29134. doi: 10.4161/psb.29134.
7
Environmental stresses modulate abundance and timing of alternatively spliced circadian transcripts in Arabidopsis.环境胁迫调节拟南芥中可变剪接circadian 转录本的丰度和时间。
Mol Plant. 2015 Feb;8(2):207-27. doi: 10.1016/j.molp.2014.10.011. Epub 2015 Jan 8.
8
SKIP Confers Osmotic Tolerance during Salt Stress by Controlling Alternative Gene Splicing in Arabidopsis.SKIP 通过控制拟南芥中的选择性基因剪接在盐胁迫下赋予渗透耐受性。
Mol Plant. 2015 Jul;8(7):1038-52. doi: 10.1016/j.molp.2015.01.011. Epub 2015 Jan 21.
9
Intron retention in the 5'UTR of the novel ZIF2 transporter enhances translation to promote zinc tolerance in arabidopsis.新型ZIF2转运蛋白5'非翻译区的内含子保留增强翻译以促进拟南芥对锌的耐受性。
PLoS Genet. 2014 May 15;10(5):e1004375. doi: 10.1371/journal.pgen.1004375. eCollection 2014.
10
Sucrose metabolism: gateway to diverse carbon use and sugar signaling.蔗糖代谢:通向多样碳利用和糖信号的大门。
Annu Rev Plant Biol. 2014;65:33-67. doi: 10.1146/annurev-arplant-050213-040251. Epub 2014 Feb 22.