Chen Wanghao, Yu Qiang, Chen Bo, Lu Xingyu, Li Qiaoyu
Department of Neurosurgery, People's Hospital Affiliated to Jiangsu University, Zhenjiang, Jiangsu Province, China.
Oncotarget. 2016 Aug 16;7(33):53392-53413. doi: 10.18632/oncotarget.10534.
Glioma is often diagnosed at a later stage, and the high risk of recurrence remains a major challenge. We hypothesized that the microRNA expression profile may serve as a biomarker for the prognosis and prediction of glioblastoma recurrence. We defined microRNAs that were associated with good and poor prognosis in 300 specimens of glioblastoma from the Cancer Genome Atlas. By analyzing microarray gene expression data and clinical information from three random groups, we identified 7 microRNAs that have prognostic and prognostic accuracy: microRNA-124a, microRNA-129, microRNA-139, microRNA-15b, microRNA-21, microRNA-218 and microRNA-7. The differential expression of these miRNAs was verified using an independent set of glioma samples from the Affiliated People's Hospital of Jiangsu University. We used the log-rank test and the Kaplan-Meier method to estimate correlations between the miRNA signature and disease-free survival/overall survival. Using the LASSO model, we observed a uniform significant difference in disease-free survival and overall survival between patients with high-risk and low-risk miRNA signature scores. Furthermore, the prognostic capability of the seven-miRNA signature was demonstrated by receiver operator characteristic curve analysis. A Circos plot was generated to examine the network of genes and pathways predicted to be targeted by the seven-miRNA signature. The seven-miRNA-based classifier should be useful in the stratification and individualized management of patients with glioma.
胶质瘤通常在较晚期才被诊断出来,而高复发风险仍然是一个重大挑战。我们假设微小RNA表达谱可能作为胶质母细胞瘤复发的预后和预测生物标志物。我们在来自癌症基因组图谱的300份胶质母细胞瘤标本中定义了与预后良好和不良相关的微小RNA。通过分析三个随机分组的微阵列基因表达数据和临床信息,我们鉴定出7种具有预后和预后准确性的微小RNA:微小RNA-124a、微小RNA-129、微小RNA-139、微小RNA-15b、微小RNA-21、微小RNA-218和微小RNA-7。使用来自江苏大学附属人民医院的一组独立的胶质瘤样本验证了这些微小RNA的差异表达。我们使用对数秩检验和Kaplan-Meier方法来估计微小RNA特征与无病生存期/总生存期之间的相关性。使用LASSO模型,我们观察到高风险和低风险微小RNA特征评分患者在无病生存期和总生存期方面存在一致的显著差异。此外,通过受试者工作特征曲线分析证明了七微小RNA特征的预后能力。生成了一个Circos图来检查预测被七微小RNA特征靶向的基因和通路网络。基于七微小RNA的分类器应该有助于胶质瘤患者的分层和个体化管理。