从法国涂抹成熟奶酪芒斯特中分离出的可变棒状杆菌Mu292的基因组序列草图
Draft Genome Sequence of Corynebacterium variabile Mu292, Isolated from Munster, a French Smear-Ripened Cheese.
作者信息
Dugat-Bony Eric, Sarthou Anne-Sophie, Loux Valentin, Vidal Marie, Bonnarme Pascal, Irlinger Françoise, Layec Séverine
机构信息
UMR Génie et Microbiologie des Procédés Alimentaires, GMPA, AgroParisTech, INRA, Université Paris-Saclay, Thiverval-Grignon, France.
MaIAGE, INRA, Université Paris-Saclay, Jouy-en-Josas, France.
出版信息
Genome Announc. 2016 Jul 21;4(4):e00669-16. doi: 10.1128/genomeA.00669-16.
Abstract
Here, we report the draft genome sequence of Corynebacterium variabile Mu292, which was originally isolated from the surface of Munster, a French smear-ripened cheese. This genome investigation will improve our knowledge on the molecular determinants potentially involved in the adaptation of this strain during the Munster-type cheese manufacturing process.
摘要
在此，我们报告可变棒状杆菌Mu292的基因组序列草图，该菌株最初从法国涂抹成熟干酪芒斯特干酪的表面分离得到。这项基因组研究将增进我们对该菌株在芒斯特型干酪制造过程中潜在适应性分子决定因素的了解。
相似文献
1
Draft Genome Sequence of Corynebacterium variabile Mu292, Isolated from Munster, a French Smear-Ripened Cheese.从法国涂抹成熟奶酪芒斯特中分离出的可变棒状杆菌Mu292的基因组序列草图
Genome Announc. 2016 Jul 21;4(4):e00669-16. doi: 10.1128/genomeA.00669-16.
2
Complete genome sequence of Corynebacterium variabile DSM 44702 isolated from the surface of smear-ripened cheeses and insights into cheese ripening and flavor generation.从涂抹奶酪表面分离得到的可变棒杆菌 DSM 44702 的全基因组序列及其在奶酪成熟和风味生成中的作用
BMC Genomics. 2011 Nov 3;12:545. doi: 10.1186/1471-2164-12-545.
3
Corynebacterium mooreparkense sp. nov. and Corynebacterium casei sp. nov., isolated from the surface of a smear-ripened cheese.新种摩尔帕克棒状杆菌和新种干酪棒状杆菌，从涂抹成熟干酪表面分离得到。
Int J Syst Evol Microbiol. 2001 May;51(Pt 3):843-852. doi: 10.1099/00207713-51-3-843.
4
Genome sequence of Corynebacterium casei UCMA 3821, isolated from a smear-ripened cheese.干酪乳杆菌 UCMA3821 基因组序列，该菌分离自一种涂抹型奶酪。
J Bacteriol. 2012 Feb;194(3):738-9. doi: 10.1128/JB.06496-11.
5
Corynebacterium mooreparkense, a later heterotypic synonym of Corynebacterium variabile.穆尔帕克棒状杆菌，可变棒状杆菌的一个后来的异型同义词。
Int J Syst Evol Microbiol. 2005 May;55(Pt 3):1129-1131. doi: 10.1099/ijs.0.63420-0.
6
Complete genome sequence of Corynebacterium casei LMG S-19264T (=DSM 44701T), isolated from a smear-ripened cheese.从涂抹成熟奶酪中分离得到的干酪棒状杆菌LMG S-19264T（=DSM 44701T）的全基因组序列
J Biotechnol. 2014 Nov 10;189:76-7. doi: 10.1016/j.jbiotec.2014.08.038. Epub 2014 Sep 2.
7
Sources of the adventitious microflora of a smear-ripened cheese.涂抹成熟干酪中偶然存在的微生物群落来源。
J Appl Microbiol. 2006 Sep;101(3):668-81. doi: 10.1111/j.1365-2672.2006.02922.x.
8
Interactions between yeasts and bacteria in the smear surface-ripened cheeses.涂抹型表面成熟干酪中酵母与细菌之间的相互作用。
Int J Food Microbiol. 2001 Sep 19;69(1-2):1-10. doi: 10.1016/s0168-1605(01)00567-0.
9
Surface microflora of four smear-ripened cheeses.四种涂抹成熟干酪的表面微生物群落
Appl Environ Microbiol. 2005 Nov;71(11):6489-500. doi: 10.1128/AEM.71.11.6489-6500.2005.
10
Biodiversity of the Surface Microbial Consortia from Limburger, Reblochon, Livarot, Tilsit, and Gubbeen Cheeses.从林堡干酪、雷布罗申干酪、利瓦罗特干酪、提尔希特干酪和古本干酪中分离的表面微生物群落的多样性。
Microbiol Spectr. 2014 Feb;2(1):CM-0010-2012. doi: 10.1128/microbiolspec.CM-0010-2012.
引用本文的文献
1
Distribution of ε-Poly-l-Lysine Synthetases in Coryneform Bacteria Isolated from Cheese and Human Skin.ε-聚赖氨酸合酶在奶酪和人体皮肤分离的棒状杆菌中的分布。
Appl Environ Microbiol. 2021 Apr 27;87(10). doi: 10.1128/AEM.01841-20.
本文引用的文献
1
The standard operating procedure of the DOE-JGI Microbial Genome Annotation Pipeline (MGAP v.4).美国能源部联合基因组研究所微生物基因组注释流程（MGAP v.4）的标准操作程序。
Stand Genomic Sci. 2015 Oct 26;10:86. doi: 10.1186/s40793-015-0077-y. eCollection 2015.
2
Biodiversity of the Surface Microbial Consortia from Limburger, Reblochon, Livarot, Tilsit, and Gubbeen Cheeses.从林堡干酪、雷布罗申干酪、利瓦罗特干酪、提尔希特干酪和古本干酪中分离的表面微生物群落的多样性。
Microbiol Spectr. 2014 Feb;2(1):CM-0010-2012. doi: 10.1128/microbiolspec.CM-0010-2012.
3
Cheese rind microbial communities: diversity, composition and origin.奶酪外皮微生物群落：多样性、组成及来源
FEMS Microbiol Lett. 2015 Jan;362(2):1-11. doi: 10.1093/femsle/fnu015. Epub 2014 Dec 4.
4
Genome sequence of the squalene-degrading bacterium Corynebacterium terpenotabidum type strain Y-11(T) (= DSM 44721(T)).角鲨烯降解细菌萜类棒状杆菌模式菌株Y-11(T)（= DSM 44721(T)）的基因组序列。
Stand Genomic Sci. 2013 Dec 31;9(3):505-13. doi: 10.4056/sigs.4588337. eCollection 2014 Jun 15.
5
Complete genome sequence of Corynebacterium casei LMG S-19264T (=DSM 44701T), isolated from a smear-ripened cheese.从涂抹成熟奶酪中分离得到的干酪棒状杆菌LMG S-19264T（=DSM 44701T）的全基因组序列
J Biotechnol. 2014 Nov 10;189:76-7. doi: 10.1016/j.jbiotec.2014.08.038. Epub 2014 Sep 2.
6
Type I restriction enzymes and their relatives.I 型限制酶及其相关酶。
Nucleic Acids Res. 2014 Jan;42(1):20-44. doi: 10.1093/nar/gkt847. Epub 2013 Sep 24.
7
Compartmentalization and regulation of arylsulfatase activities in Streptomyces sp., Microbacterium sp. and Rhodococcus sp. soil isolates in response to inorganic sulfate limitation.在受到无机硫酸盐限制时，链霉菌属、微杆菌属和红球菌属土壤分离株中芳基硫酸酯酶活性的区室化和调节。
Microbiol Res. 2013 Jan 15;168(1):12-21. doi: 10.1016/j.micres.2012.08.001. Epub 2012 Aug 24.
8
SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing.SPAdes：一种新的基因组组装算法及其在单细胞测序中的应用
J Comput Biol. 2012 May;19(5):455-77. doi: 10.1089/cmb.2012.0021. Epub 2012 Apr 16.
9
Genome sequence of Corynebacterium casei UCMA 3821, isolated from a smear-ripened cheese.干酪乳杆菌 UCMA3821 基因组序列，该菌分离自一种涂抹型奶酪。
J Bacteriol. 2012 Feb;194(3):738-9. doi: 10.1128/JB.06496-11.
10
Complete genome sequence of Corynebacterium variabile DSM 44702 isolated from the surface of smear-ripened cheeses and insights into cheese ripening and flavor generation.从涂抹奶酪表面分离得到的可变棒杆菌 DSM 44702 的全基因组序列及其在奶酪成熟和风味生成中的作用
BMC Genomics. 2011 Nov 3;12:545. doi: 10.1186/1471-2164-12-545.
Zotero 插件