嗜热丝状不产氧光合细菌氯弯曲菌属菌株isl-2的基因组草图序列，该菌株从冰岛斯特罗库尔间歇泉分离得到
Draft Genome Sequence of Chloroflexus sp. Strain isl-2, a Thermophilic Filamentous Anoxygenic Phototrophic Bacterium Isolated from the Strokkur Geyser, Iceland.
作者信息
Gaisin Vasil A, Ivanov Timophey M, Kuznetsov Boris B, Gorlenko Vladimir M, Grouzdev Denis S
机构信息
Research Center of Biotechnology of the Russian Academy of Sciences, Moscow, Russian Federation.
Research Center of Biotechnology of the Russian Academy of Sciences, Moscow, Russian Federation
出版信息
Genome Announc. 2016 Jul 21;4(4):e00714-16. doi: 10.1128/genomeA.00714-16.
Abstract
We report here the draft genome sequence of the thermophilic filamentous anoxygenic phototrophic bacterium Chloroflexus sp. strain isl-2, which was isolated from the Strokkur geyser, Iceland, and contains 5,222,563 bp with a G+C content of 59.65%. The annotated genome sequence offers the genetic basis for understanding the strain's ecological role as a phototrophic bacterium within the bacterial community.
摘要
我们在此报告嗜热丝状无氧光合细菌绿弯菌属菌株isl-2的基因组序列草图，该菌株从冰岛的斯特罗库尔间歇泉分离得到，基因组大小为5,222,563 bp，G+C含量为59.65%。注释后的基因组序列为理解该菌株在细菌群落中作为光合细菌的生态作用提供了遗传基础。
相似文献
1
Draft Genome Sequence of Chloroflexus sp. Strain isl-2, a Thermophilic Filamentous Anoxygenic Phototrophic Bacterium Isolated from the Strokkur Geyser, Iceland.嗜热丝状不产氧光合细菌氯弯曲菌属菌株isl-2的基因组草图序列，该菌株从冰岛斯特罗库尔间歇泉分离得到
Genome Announc. 2016 Jul 21;4(4):e00714-16. doi: 10.1128/genomeA.00714-16.
2
Chloroflexus islandicus sp. nov., a thermophilic filamentous anoxygenic phototrophic bacterium from a geyser.嗜热栖热放线菌新种，一种来自间歇泉的嗜热丝状无氧光合细菌。
Int J Syst Evol Microbiol. 2017 May;67(5):1381-1386. doi: 10.1099/ijsem.0.001820. Epub 2017 May 30.
3
Draft Genome Sequence of a Sulfide-Oxidizing, Autotrophic Filamentous Anoxygenic Phototrophic Bacterium, Chloroflexus sp. Strain MS-G (Chloroflexi).硫化物氧化自养丝状无氧光合细菌绿弯菌属菌株MS-G（绿弯菌门）的基因组序列草图
Genome Announc. 2014 Sep 4;2(5):e00872-14. doi: 10.1128/genomeA.00872-14.
4
Sulfide-dependent Photoautotrophy in the Filamentous Anoxygenic Phototrophic Bacterium, Chloroflexus aggregans.丝状硫依赖光自养菌聚球蓝细菌的光自养作用。
Microbes Environ. 2019 Sep 25;34(3):304-309. doi: 10.1264/jsme2.ME19008. Epub 2019 Aug 8.
5
Draft Genome Sequence of the Anoxygenic Phototrophic Bacterium sp. Strain U11-2br, Isolated from a Mountain Lake on the Ulagan Plateau.从乌拉干高原一个高山湖泊中分离出的无氧光合细菌菌株U11 - 2br的基因组序列草图
Microbiol Resour Announc. 2021 Oct 14;10(41):e0067521. doi: 10.1128/MRA.00675-21.
6
Draft Genome Sequence of the Aerobic Anoxygenic Phototrophic Bacterium sp. Strain OBYS 0001, Isolated from Coastal Seawater in Otsuchi Bay, Japan.从日本大槌湾沿海海水中分离出的需氧不产氧光合细菌sp.菌株OBYS 0001的基因组序列草图
Microbiol Resour Announc. 2021 Jul 15;10(28):e0048821. doi: 10.1128/MRA.00488-21.
7
Draft Genome Sequence of the Anoxygenic Phototrophic Bacterium sp. Strain Az07, Isolated from a Brackish Canal.从咸淡水运河分离出的不产氧光合细菌Az07菌株的基因组序列草图
Microbiol Resour Announc. 2021 Sep 23;10(38):e0058521. doi: 10.1128/MRA.00585-21.
8
Draft genome of s sp. MS-CIW-1, of the sp. MS-G group from Mushroom Spring, Yellowstone National Park.黄石国家公园蘑菇泉MS - G组s sp.的MS - CIW - 1菌株的基因组草图。
Microbiol Resour Announc. 2024 Mar 12;13(3):e0071023. doi: 10.1128/mra.00710-23. Epub 2024 Feb 1.
9
Draft Genome Sequence of a Filamentous Anoxygenic Phototrophic Bacterium, " Roseilinea sp. Strain NK_OTU-006," Recovered from Metagenomic Data of a Hot Spring Microbial Mat.从温泉微生物垫宏基因组数据中获得的丝状无氧光合细菌“玫瑰线菌属NK_OTU - 006菌株”的基因组草图序列
Microbiol Resour Announc. 2020 Dec 10;9(50):e01104-20. doi: 10.1128/MRA.01104-20.
10
Filamentous anoxygenic phototrophic bacteria from cyanobacterial mats of Alla hot springs (Barguzin Valley, Russia).来自俄罗斯巴尔古津山谷阿拉温泉蓝藻席的丝状无氧光合细菌。
Extremophiles. 2015 Nov;19(6):1067-76. doi: 10.1007/s00792-015-0777-7. Epub 2015 Aug 20.
引用本文的文献
1
Thermophilic Dehalococcoidia with unusual traits shed light on an unexpected past.具有不寻常特征的嗜热脱卤代球菌揭示了一个出人意料的过去。
ISME J. 2023 Jul;17(7):952-966. doi: 10.1038/s41396-023-01405-0. Epub 2023 Apr 11.
2
Sulfide-dependent Photoautotrophy in the Filamentous Anoxygenic Phototrophic Bacterium, Chloroflexus aggregans.丝状硫依赖光自养菌聚球蓝细菌的光自养作用。
Microbes Environ. 2019 Sep 25;34(3):304-309. doi: 10.1264/jsme2.ME19008. Epub 2019 Aug 8.
本文引用的文献
1
ProDeGe: a computational protocol for fully automated decontamination of genomes.ProDeGe：一种用于基因组全自动净化的计算协议。
ISME J. 2016 Jan;10(1):269-72. doi: 10.1038/ismej.2015.100. Epub 2015 Jun 9.
2
SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing.SPAdes：一种新的基因组组装算法及其在单细胞测序中的应用
J Comput Biol. 2012 May;19(5):455-77. doi: 10.1089/cmb.2012.0021. Epub 2012 Apr 16.
3
Preparation of genomic DNA from bacteria.从细菌中制备基因组DNA。
Curr Protoc Mol Biol. 2001 Nov;Chapter 2:Unit 2.4. doi: 10.1002/0471142727.mb0204s56.
4
The microbial role in hot spring silicification.微生物在温泉硅化过程中的作用。
Ambio. 2004 Dec;33(8):552-8. doi: 10.1579/0044-7447-33.8.552.
Zotero 插件