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鉴定来自链霉菌属的新型菊粉果糖基转移酶 DFA I。

Identification of a novel DFA I-producing inulin fructotransferase from Streptomyces davawensis.

机构信息

State Key Laboratory of Food Science and Technology, Jiangnan University, Wuxi, Jiangsu, 214122, China.

State Key Laboratory of Food Science and Technology, Jiangnan University, Wuxi, Jiangsu, 214122, China; Synergetic Innovation Center of Food Safety and Nutrition, Jiangnan Universtiy, Wuxi, Jiangsu, 214122, China.

出版信息

Int J Biol Macromol. 2016 Nov;92:723-730. doi: 10.1016/j.ijbiomac.2016.07.092. Epub 2016 Jul 28.

Abstract

In this work, a novel gene encoding DFA I-forming inulin fructotransferase (IFTase) from Streptomyces davawensis SK39.001 was cloned and expressed in Escherichia coli. The enzyme was purified, identified, and characterized. The results showed that this IFTase (DFA I-forming) is a trimer (molecular weight of 125KDa) consisting of three identical subunits (the molecular weight as assayed by SDS-PAGE was approximately 40KDa). At pH 5.5 and 40°C, the maximum specific activity (approximately 100Umg) was achieved. Moreover, the enzyme was stable up to 70°C. K and V were 2.89±0.2mM and 1.94±0.9mMmin, respectively. For exploring putative active sites and probable catalytic mechanisms, homology modelling and molecular docking methods after site-directed mutagenesis were applied to IFTase (DFA I-forming). The results revealed that D183 and E194 were potential catalytic residues of the purified enzyme.

摘要

在这项工作中,从链霉菌 SK39.001 中克隆并在大肠杆菌中表达了一种新型的菊粉果糖基转移酶(IFTase)基因,该基因编码 DFA I 形成。对酶进行了纯化、鉴定和特性分析。结果表明,该 IFTase(DFA I 形成)是由三个相同亚基组成的三聚体(分子量为 125KDa)(通过 SDS-PAGE 测定的分子量约为 40KDa)。在 pH5.5 和 40°C 下,达到最大比活力(约 100Umg)。此外,该酶在 70°C 下稳定。K 和 V 分别为 2.89±0.2mM 和 1.94±0.9mMmin。为了探索可能的活性位点和可能的催化机制,对 IFTase(DFA I 形成)进行了定向突变后的同源建模和分子对接方法。结果表明,D183 和 E194 是纯化酶的潜在催化残基。

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