Rensvold Jarred W, Krautkramer Kimberly A, Dowell James A, Denu John M, Pagliarini David J
From the Morgridge Institute for Research, Madison, Wisconsin 53715.
the Department of Biomolecular Chemistry and Wisconsin Institute for Discovery, University of Wisconsin-Madison, Madison, Wisconsin 53715, and.
J Biol Chem. 2016 Sep 30;291(40):20827-20837. doi: 10.1074/jbc.M116.727701. Epub 2016 Aug 5.
Mitochondria are essential organelles that adapt to stress and environmental changes. Among the nutrient signals that affect mitochondrial form and function is iron, whose depletion initiates a rapid and reversible decrease in mitochondrial biogenesis through unclear means. Here we demonstrate that, unlike the canonical iron-induced alterations to transcript stability, loss of iron dampens the transcription of genes encoding mitochondrial proteins with no change to transcript half-life. Using mass spectrometry, we demonstrate that these transcriptional changes are accompanied by dynamic alterations to histone acetylation and methylation levels that are largely reversible upon readministration of iron. Moreover, histone deacetylase inhibition abrogates the decreased histone acetylation observed upon iron deprivation and restores normal transcript levels at genes encoding mitochondrial proteins. Collectively, we demonstrate that deprivation of an essential nutrient induces transcriptional repression of organellar biogenesis involving epigenetic alterations.
线粒体是适应应激和环境变化的重要细胞器。影响线粒体形态和功能的营养信号之一是铁,铁的缺乏会通过不明机制引发线粒体生物合成的快速且可逆的减少。在这里,我们证明,与经典的铁诱导的转录本稳定性改变不同,铁的缺失会抑制编码线粒体蛋白的基因的转录,而转录本半衰期没有变化。通过质谱分析,我们证明这些转录变化伴随着组蛋白乙酰化和甲基化水平的动态改变,在重新补充铁后这些改变在很大程度上是可逆的。此外,组蛋白去乙酰化酶抑制可消除铁缺乏时观察到的组蛋白乙酰化减少,并恢复编码线粒体蛋白的基因的正常转录水平。我们共同证明,必需营养素的缺乏会诱导涉及表观遗传改变的细胞器生物合成的转录抑制。