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游动镰孢单胞菌属,新属,新种,一种从牛粪产甲烷反应器中分离出的严格厌氧、分解氨基酸的细菌。

Falcatimonas natans gen. nov., sp. nov., a strictly anaerobic, amino-acid-decomposing bacterium isolated from a methanogenic reactor of cattle waste.

作者信息

Watanabe Misa, Kaku Nobuo, Ueki Katsuji, Ueki Atsuko

机构信息

Faculty of Agriculture, Yamagata University, Wakaba-machi 1-23, Tsuruoka, Yamagata 997-8555, Japan.

出版信息

Int J Syst Evol Microbiol. 2016 Nov;66(11):4639-4644. doi: 10.1099/ijsem.0.001403. Epub 2016 Aug 8.

Abstract

A strictly anaerobic bacterial strain (WN011T) was isolated from a methanogenic reactor treating waste from cattle farms. Cells of the strain were Gram-stain-negative curved rods with a polar flagellum. Spores were not produced. The optimum temperature for growth was 35-37 °C and the optimum pH was 6.7. The strain did not utilize carbohydrates as growth substrates. The strain grew in PY medium and produced acetate, butyrate, isovalerate and H2 as well as propionate and isobutyrate as minor products. Amino acids (l-isoleucine, l-leucine, l-lysine, l-serine, l-threonine and l-valine) added to PY medium enhanced growth of the strain and increased the amounts of fermentation products. Oxidase, catalase and nitrate-reducing activities were negative. Hydrogen sulfide was produced. The genomic DNA G+C content was 38.8 mol%. Compounds related to iso-C15 : 0 (fatty acid, dimethylacetal and aldehyde) were detected as predominant components by the cellular fatty acids analysis. The diagnostic diamino acid of the cell-wall peptidoglycan was meso-diaminopimelic acid. On the basis of 16S rRNA gene sequences, three clones from wastewater were very closely related to strain WN011T (up to 99.9 % sequence similarity). The most closely related described species were those in cluster XIVa of the class Clostridia such as Ruminococcus gauvreauii (93.8 % 16S rRNA gene sequence similarity), Clostridium fimetarium (93.5 %) and Clostridium bolteae(93.5 %). Based on the distinct differences in phylogenetic and phenotypic characteristics of strain WN011T from those of related species, it is concluded that strain WN011T represents a novel species of a new genus in the family Lachnospiraceae, for which the name Falcatimonas natans gen. nov., sp. nov. is proposed. The type strain of the type species is WN011T (=JCM 16476T=DSM 22923T).

摘要

从处理奶牛场废弃物的产甲烷反应器中分离出一株严格厌氧的细菌菌株(WN011T)。该菌株细胞为革兰氏染色阴性的弯曲杆菌,具极生鞭毛,不产芽孢。生长的最适温度为35 - 37°C,最适pH为6.7。该菌株不利用碳水化合物作为生长底物。该菌株在PY培养基中生长,产生乙酸、丁酸、异戊酸和氢气,以及少量丙酸和异丁酸。添加到PY培养基中的氨基酸(L - 异亮氨酸、L - 亮氨酸、L - 赖氨酸、L - 丝氨酸、L - 苏氨酸和L - 缬氨酸)促进了该菌株的生长并增加了发酵产物的量。氧化酶、过氧化氢酶和硝酸盐还原活性均为阴性,产生硫化氢。基因组DNA的G + C含量为38.8mol%。通过细胞脂肪酸分析,检测到与异C15:0相关的化合物(脂肪酸、二甲基缩醛和醛)为主要成分。细胞壁肽聚糖的诊断性二氨基酸为内消旋二氨基庚二酸。基于16S rRNA基因序列,来自废水的三个克隆与菌株WN011T密切相关(序列相似性高达99.9%)。描述的最密切相关的物种是梭菌纲第十四a簇中的那些物种,如高夫罗氏瘤胃球菌(16S rRNA基因序列相似性为93.8%)、粪栖梭菌(93.5%)和博氏梭菌(93.5%)。基于菌株WN011T与相关物种在系统发育和表型特征上的明显差异,得出结论:菌株WN011T代表毛螺菌科一个新属的一个新物种,为此提出新属名Falcatimonas(滑行镰刀菌属),新种名natans(游动镰刀菌)。模式种的模式菌株为WN011T(=JCM 16476T = DSM 22923T)。

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