Fachbereich Physik und Forschungszentrum OPTIMAS, University of Kaiserslautern , Erwin-Schrödinger-Straße, D-67663 Kaiserslautern, Germany.
Langmuir. 2016 Sep 13;32(36):9156-62. doi: 10.1021/acs.langmuir.6b02229. Epub 2016 Aug 29.
The adsorption of streptavidin is studied on two surfaces, graphite and titanium dioxide, using accelerated molecular dynamics. Adsorption on graphite leads to strong conformational changes while the protein spreads out over the surface. Interestingly, also adsorption on the highly hydrophilic rutile surface induces considerable spreading of the protein. We pin down the cause for this unfolding to the interaction of the protein with the ordered water layers above the rutile surface. For special orientations, the protein penetrates the ordered water layers and comes into direct contact with the surface where the positively charged amino acids settle in places adjacent to the negatively charged top surface atom layer of rutile. We conclude that for both surface materials studied, streptavidin changes its conformation so strongly that it loses its potential for binding biotin. Our results are in good qualitative agreement with available experimental studies.
使用加速分子动力学研究了链霉亲和素在两种表面(石墨和二氧化钛)上的吸附。在石墨上的吸附导致强烈的构象变化,而蛋白质在表面上展开。有趣的是,即使在高亲水性金红石表面上的吸附也会导致蛋白质的显著展开。我们将这种展开的原因归结为蛋白质与金红石表面上方有序水层的相互作用。对于特殊的取向,蛋白质会穿透有序水层并与表面直接接触,其中带正电荷的氨基酸会在与金红石的带负电荷的顶层原子层相邻的位置沉淀。我们得出结论,对于所研究的两种表面材料,链霉亲和素的构象变化非常强烈,以至于它失去了与生物素结合的潜力。我们的结果与现有实验研究的定性结果非常一致。