Department of Biomedical Affairs, Edward Via College of Osteopathic Medicine, Spartanburg, SC 29303, USA.
Center for Excellence in Product Design and Advanced Manufacturing, North Carolina A&T State University, Greensboro, NC 27411, USA.
Int J Mol Sci. 2022 Feb 23;23(5):2432. doi: 10.3390/ijms23052432.
The interaction between bone morphogenetic protein-2 (BMP-2) and the surface of biomaterials is essential for the restoration of bone and cartilage tissue, inducing cellular differentiation and proliferation. The properties of the surface, including topology features, regulate the conformation and bioactivity of the protein. In this research, we investigated the influence of nanopatterned surfaces on the interaction of a homodimer BMP-2 with graphite material by combining molecular dynamics (MD) and steered molecular dynamics (SMD) simulations. The graphite substrates were patterned as flat, linear grating, square, and circular profiles in combination with BMP-2 conformation in the side-on configuration. Ramachandran plots for the wrist and knuckle epitopes indicated no steric hindrances and provided binding sites to type I and type II receptors. Results showed two optimal patterns that increased protein adsorption of the lower monomer while preserving the secondary structure and leaving the upper monomer free to interact with the cells. Charged residues arginine and lysine and polar residues histidine and tyrosine were the main residues responsible for the strong interaction with the graphite surface. This research provides new molecular-level insights to further understand the mechanisms underlying protein adsorption on nanoscale patterned substrates.
骨形态发生蛋白-2(BMP-2)与生物材料表面的相互作用对于骨和软骨组织的修复至关重要,它可以诱导细胞的分化和增殖。表面的特性,包括拓扑特征,调节蛋白质的构象和生物活性。在这项研究中,我们通过结合分子动力学(MD)和导向分子动力学(SMD)模拟,研究了纳米图案表面对同型二聚体 BMP-2 与石墨材料相互作用的影响。将石墨基底设计为平面、线性光栅、方形和圆形轮廓,并结合侧位构象的 BMP-2 构象。手腕和指节表位的 Ramachandran 图谱表明没有空间位阻,并为 I 型和 II 型受体提供了结合位点。结果表明有两种最佳模式可以增加下单体的蛋白质吸附,同时保持二级结构,并使上单体自由与细胞相互作用。带电荷的残基精氨酸和赖氨酸以及极性残基组氨酸和酪氨酸是与石墨表面发生强相互作用的主要残基。这项研究为进一步理解蛋白质在纳米图案化基底上的吸附机制提供了新的分子水平见解。