Sciuto Katia, Moro Isabella
Department of Biology, University of Padova, via U. Bassi 58/B, 35131 Padova, Italy.
Department of Biology, University of Padova, via U. Bassi 58/B, 35131 Padova, Italy.
Mol Phylogenet Evol. 2016 Dec;105:15-35. doi: 10.1016/j.ympev.2016.08.010. Epub 2016 Aug 18.
Cyanobacteria are widespread prokaryotes that are able to live in extreme conditions such as thermal springs. Strains attributable to the genus Leptolyngbya are among the most common cyanobacteria sampled from thermal environments. Leptolyngbya is a character-poor taxon that was demonstrated to be polyphyletic based on molecular analyses. The recent joining of 16S rRNA gene phylogenies with 16S-23S ITS secondary structure analysis is a useful approach to detect new cryptic taxa and has led to the separation of new genera from Leptolyngbya and to the description of new species inside this genus and in other related groups. In this study, phylogenetic investigations based on both the 16S rRNA gene and the 16S-23S ITS region were performed alongside 16S rRNA and 16S-23S ITS secondary structure analyses on cyanobacteria of the family Leptolyngbyaceae. These analyses focused on filamentous strains sampled from thermal springs with a morphology ascribable to the genus Leptolyngbya. The phylogenetic reconstructions showed that the Leptolyngbya-like thermal strains grouped into a monophyletic lineage that was distinct from Leptolyngbya. The 16S-23S ITS secondary structure results supported the separation of this cluster. A new genus named Thermoleptolyngbya was erected to encompass these strains, and two species were described inside this new taxon: T. albertanoae and T. oregonensis.
蓝细菌是广泛分布的原核生物,能够生活在温泉等极端环境中。可归属于细鞘丝藻属的菌株是从热环境中采样的最常见蓝细菌之一。细鞘丝藻属是一个特征较少的分类单元,基于分子分析表明它是多系的。最近将16S rRNA基因系统发育与16S - 23S ITS二级结构分析相结合,是检测新的隐存分类单元的一种有用方法,并导致从细鞘丝藻属中分离出新属,以及在该属和其他相关类群中描述新物种。在本研究中,基于16S rRNA基因和16S - 23S ITS区域进行了系统发育研究,同时对细鞘丝藻科蓝细菌进行了16S rRNA和16S - 23S ITS二级结构分析。这些分析集中于从温泉中采样的丝状菌株,其形态可归属于细鞘丝藻属。系统发育重建表明,类似细鞘丝藻属的热菌株聚为一个单系谱系,与细鞘丝藻属不同。16S - 23S ITS二级结构结果支持了该类群的分离。建立了一个名为嗜热细鞘丝藻属的新属来包含这些菌株,并在这个新分类单元中描述了两个物种:阿尔贝塔嗜热细鞘丝藻和俄勒冈嗜热细鞘丝藻。