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描述 sp. nov.,一种来自埃及尼罗河盆地的新型蓝细菌:Oculatellales 目相关属的多相分析和比较研究。

Description of sp. nov., a Novel Cyanobacterium from the Nile River Basin, Egypt: A Polyphasic Analysis and Comparative Study of Related Genera in the Oculatellales Order.

机构信息

Interdisciplinary Centre of Marine and Environmental Research, University of Porto, Terminal de Cruzeiros de Leixões, Av. General Norton de Matos s/n, 4450-208 Matosinhos, Portugal.

Department of Botany and Microbiology, Faculty of Science, Sohag University, Sohag 82524, Egypt.

出版信息

Toxins (Basel). 2024 Oct 21;16(10):451. doi: 10.3390/toxins16100451.

Abstract

In this paper, we examine the filamentous cyanobacterial strain NILCB16 and describe it as a new species within the genus . The original population was sampled from a mat growing in an irrigation canal in the Nile River, Egypt. Initially classified under or the strain is a potential producer of the toxins microcystin and β-N-Methylamino-L-Alanine (BMAA). Additionally, we reviewed the taxonomic relationships between the Oculatellales genera. To describe the new species, we conducted a polyphasic study, encompassing 16S rRNA gene phylogenetic analyses performed using both Maximum Likelihood and Bayesian methods, sequence identity (p-distance) analysis, 16S-23S ITS secondary structures, and morphological and habitat comparisons. The phylogenetic analysis revealed that strain NILCB16 clustered within the clade with strong phylogenetic support, but in a distinct position from other species in the genus. The strain shared a maximum 16S rRNA gene identity of 97.3% with and 96.1% with the type species, . Morphologically, NILCB16 can be differentiated from other species in the genus by its lack of false branching. Our phylogenetic analyses also show that , , , and are clustered with strong phylogenetic support. They exhibit high 16S rRNA gene identity and are morphologically indistinguishable, suggesting they could potentially be merged into a single genus in the future.

摘要

在本文中,我们研究了丝状蓝藻菌株 NILCB16,并将其描述为属内的一个新种。原始种群是从埃及尼罗河灌溉渠中的一个垫中采集的。最初被分类为 或 ,但该菌株是微囊藻毒素和 β-N-甲基氨基-L-丙氨酸 (BMAA) 的潜在生产者。此外,我们还回顾了 Oculatellales 属之间的分类关系。为了描述这个新种,我们进行了多相研究,包括使用最大似然法和贝叶斯法进行的 16S rRNA 基因系统发育分析、序列同一性 (p-距离) 分析、16S-23S ITS 二级结构以及形态和生境比较。系统发育分析表明,菌株 NILCB16 在 进化枝中聚类,具有很强的系统发育支持,但与该属的其他种处于不同的位置。该菌株与 和模式种 的 16S rRNA 基因相似度最高,分别为 97.3%和 96.1%。形态上,NILCB16 与该属的其他种不同,因为它没有假分支。我们的系统发育分析还表明, 、 、 和 聚类具有很强的系统发育支持。它们具有很高的 16S rRNA 基因相似度,形态上无法区分,这表明它们将来可能会被合并为一个属。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b683/11510932/a91a6424b3e5/toxins-16-00451-g001.jpg

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