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肺成纤维细胞中Caveolin-1基因表达的表观遗传调控

Epigenetic Regulation of Caveolin-1 Gene Expression in Lung Fibroblasts.

作者信息

Sanders Yan Y, Liu Hui, Scruggs Anne M, Duncan Steven R, Huang Steven K, Thannickal Victor J

机构信息

1 Division of Pulmonary, Allergy, and Critical Care, Department of Medicine, University of Alabama at Birmingham, Birmingham, Alabama; and.

2 Division of Pulmonary and Critical Care Medicine, Department of Internal Medicine, University of Michigan, Ann Arbor, Michigan.

出版信息

Am J Respir Cell Mol Biol. 2017 Jan;56(1):50-61. doi: 10.1165/rcmb.2016-0034OC.

Abstract

Fibrotic disorders are associated with tissue accumulation of fibroblasts. We recently showed that caveolin (Cav)-1 gene suppression by a profibrotic cytokine, transforming growth factor (TGF)-β1, contributes to fibroblast proliferation and apoptosis resistance. Cav-1 has been shown to be constitutively suppressed in idiopathic pulmonary fibrosis (IPF), but mechanisms for this suppression are incompletely understood. We hypothesized that epigenetic processes contribute to Cav-1 down-regulation in IPF lung fibroblasts, and after fibrogenic stimuli. Cav-1 expression levels, DNA methylation status, and histone modifications associated with the Cav-1 promoter were examined by PCR, Western blots, pyrosequencing, or chromatin immunoprecipitation assays in IPF lung fibroblasts, normal fibroblasts after TGF-β1 stimulation, or in murine lung fibroblasts after bleomycin injury. Methylation-specific PCR demonstrated methylated and unmethylated Cav-1 DNA copies in all groups. Despite significant changes in Cav-1 expression, no changes in DNA methylation were observed in CpG islands or CpG island shores of the Cav-1 promoter by pyrosequencing of lung fibroblasts from IPF lungs, in response to TGF-β1, or after bleomycin-induced murine lung injury, when compared with respective controls. In contrast, the association of Cav-1 promoter with the active histone modification mark, H3 lysine 4 trimethylation, correlated with Cav-1 down-regulation in activated/fibrotic lung fibroblasts. Our data indicate that Cav-1 gene silencing in lung fibroblasts is actively regulated by epigenetic mechanisms that involve histone modifications, in particular H3 lysine 4 trimethylation, whereas DNA methylation does not appear to be a primary mechanism. These findings support therapeutic strategies that target histone modifications to restore Cav-1 expression in fibroblasts participating in pathogenic tissue remodeling.

摘要

纤维化疾病与成纤维细胞在组织中的积聚有关。我们最近发现,促纤维化细胞因子转化生长因子(TGF)-β1对小窝蛋白(Cav)-1基因的抑制作用,有助于成纤维细胞增殖和抗凋亡。已有研究表明,Cav-1在特发性肺纤维化(IPF)中受到持续性抑制,但其抑制机制尚不完全清楚。我们推测,表观遗传过程促成了IPF肺成纤维细胞中Cav-1的下调,以及在纤维化刺激之后的下调。通过聚合酶链反应(PCR)、蛋白质免疫印迹法、焦磷酸测序或染色质免疫沉淀试验,检测了IPF肺成纤维细胞、TGF-β1刺激后的正常成纤维细胞或博来霉素损伤后的小鼠肺成纤维细胞中Cav-1的表达水平、DNA甲基化状态以及与Cav-1启动子相关的组蛋白修饰。甲基化特异性PCR显示,所有组中均存在甲基化和未甲基化的Cav-1 DNA拷贝。尽管Cav-1的表达发生了显著变化,但通过对IPF肺成纤维细胞、TGF-β1刺激后的成纤维细胞或博来霉素诱导的小鼠肺损伤后的成纤维细胞进行焦磷酸测序发现,与各自的对照相比,Cav-1启动子的CpG岛或CpG岛岸的DNA甲基化没有变化。相反,Cav-1启动子与活性组蛋白修饰标记H3赖氨酸4三甲基化的关联,与活化/纤维化肺成纤维细胞中Cav-1的下调相关。我们的数据表明,肺成纤维细胞中Cav-1基因的沉默是由涉及组蛋白修饰(特别是H3赖氨酸4三甲基化)的表观遗传机制积极调控的,而DNA甲基化似乎不是主要机制。这些发现支持了针对组蛋白修饰的治疗策略,以恢复参与致病性组织重塑的成纤维细胞中Cav-1的表达。

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