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一项用于鉴定与日本鹌鹑体重相关DNA片段的分子基因组扫描。

A molecular genome scan to identify DNA segments associated with live weight in Japanese quail.

作者信息

Iranmanesh M, Esmailizadeh A, Mohammad Abadi M R, Zand Elmira, Mokhtari M S, Wu Dong-Dong

机构信息

Department of Animal Science, Faculty of Agriculture, Shahid Bahonar University of Kerman, PO Box 76169-133, Kerman, Iran.

State Key Laboratory of Genetic Resources and Evolution, Yunnan Laboratory of Molecular Biology of Domestic Animals, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, 650223, China.

出版信息

Mol Biol Rep. 2016 Nov;43(11):1267-1272. doi: 10.1007/s11033-016-4059-y. Epub 2016 Aug 25.

Abstract

Japanese quail is an animal model in biological studies and also a commercial bird for eggs and meat production. This study was conducted to map quantitative trait loci (QTL) affecting live weight in Japanese quail. An F2 mapping population was developed by crossing two diverse lines (meat type and egg layer) of Japanese quail. A total number of 34 F1 and 422 F2 progeny were produced by reciprocal crossing of eight pairs of parental birds. All the birds from three generations were genotyped for SSR markers that were spread across all the autosomal linkage groups. The studied traits were hatching weight and live weights at 1-5 weeks of age. QTL analysis was conducted by the regression interval mapping. Significant QTL were detected on chromosomes 1, 2, 3 (chromosome-wide significant) and 5 (genome-wide significant, P < 0.05) for body weight. Although the additive effect of the detected QTL on chromosome 5 was significant, the dominance and imprinting effects were not significant. This finding is the first report of a genome-wide significant QTL associated with live weight in Japanese quail. Our results point out to candidate DNA regions affecting live weight, a trait of great economic relevance to the Japanese quail breeding. Although these results enhance our current knowledge about the genetic control of live weight in the Japanese quail, it should be noted that the initial QTL results from the experimental designs such as backcross or F2 cannot be applied directly to the breeding programs and require further validation within the commercial lines.

摘要

日本鹌鹑是生物学研究中的一种动物模型,也是一种用于产蛋和产肉的商业禽类。本研究旨在绘制影响日本鹌鹑体重的数量性状基因座(QTL)图谱。通过将日本鹌鹑的两个不同品系(肉用型和蛋用型)杂交,构建了一个F2作图群体。通过八对亲本鸟的正反交产生了总共34只F1代和422只F2代后代。对三代的所有鸟类进行了分布在所有常染色体连锁群上的SSR标记基因分型。所研究的性状为孵化体重和1至5周龄时的体重。通过回归区间作图法进行QTL分析。在第1、2、3号染色体(全染色体显著)和第5号染色体(全基因组显著,P<0.05)上检测到与体重相关的显著QTL。虽然在第5号染色体上检测到的QTL的加性效应显著,但显性效应和印记效应不显著。这一发现是关于日本鹌鹑体重相关全基因组显著QTL的首次报道。我们的结果指出了影响体重的候选DNA区域,体重是与日本鹌鹑育种具有重大经济相关性的一个性状。虽然这些结果增进了我们目前对日本鹌鹑体重遗传控制的了解,但应该注意的是,来自回交或F2等实验设计的初步QTL结果不能直接应用于育种计划,需要在商业品系中进一步验证。

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