Suppr超能文献

用于高分辨率冷冻电镜的样本制备

Specimen Preparation for High-Resolution Cryo-EM.

作者信息

Passmore L A, Russo C J

机构信息

MRC Laboratory of Molecular Biology, Cambridge, United Kingdom.

出版信息

Methods Enzymol. 2016;579:51-86. doi: 10.1016/bs.mie.2016.04.011. Epub 2016 Jun 16.

Abstract

Imaging a material with electrons at near-atomic resolution requires a thin specimen that is stable in the vacuum of the transmission electron microscope. For biological samples, this comprises a thin layer of frozen aqueous solution containing the biomolecular complex of interest. The process of preparing a high-quality specimen is often the limiting step in the determination of structures by single-particle electron cryomicroscopy (cryo-EM). Here, we describe a systematic approach for going from a purified biomolecular complex in aqueous solution to high-resolution electron micrographs that are suitable for 3D structure determination. This includes a series of protocols for the preparation of vitrified specimens on various supports, including all-gold and graphene. We also describe techniques for troubleshooting when a preparation fails to yield suitable specimens, and common mistakes to avoid during each part of the process. Finally, we include recommendations for obtaining the highest quality micrographs from prepared specimens with current microscope, detector, and support technology.

摘要

用电子以近原子分辨率对材料进行成像需要一个在透射电子显微镜的真空中稳定的薄样本。对于生物样本来说,这包括一层含有感兴趣的生物分子复合物的冷冻水溶液薄层。制备高质量样本的过程通常是单颗粒电子冷冻显微镜(冷冻电镜)结构测定中的限制步骤。在这里,我们描述了一种从水溶液中的纯化生物分子复合物到适合三维结构测定的高分辨率电子显微照片的系统方法。这包括一系列在各种支撑物上制备玻璃化样本的方案,包括全金和石墨烯支撑物。我们还描述了制备失败无法得到合适样本时的故障排除技术,以及在过程的每个部分要避免的常见错误。最后,我们给出了利用当前的显微镜、探测器和支撑技术从制备好的样本中获得最高质量显微照片的建议。

相似文献

1
Specimen Preparation for High-Resolution Cryo-EM.
Methods Enzymol. 2016;579:51-86. doi: 10.1016/bs.mie.2016.04.011. Epub 2016 Jun 16.
2
Visualization of biological macromolecules at near-atomic resolution: cryo-electron microscopy comes of age.
Acta Crystallogr F Struct Biol Commun. 2019 Jan 1;75(Pt 1):3-11. doi: 10.1107/S2053230X18015133.
3
Ultrastable gold substrates: Properties of a support for high-resolution electron cryomicroscopy of biological specimens.
J Struct Biol. 2016 Jan;193(1):33-44. doi: 10.1016/j.jsb.2015.11.006. Epub 2015 Nov 22.
4
Application of Monolayer Graphene and Its Derivative in Cryo-EM Sample Preparation.
Int J Mol Sci. 2021 Aug 19;22(16):8940. doi: 10.3390/ijms22168940.
5
A simple and robust procedure for preparing graphene-oxide cryo-EM grids.
J Struct Biol. 2018 Oct;204(1):80-84. doi: 10.1016/j.jsb.2018.07.007. Epub 2018 Jul 11.
7
Spotiton: a prototype for an integrated inkjet dispense and vitrification system for cryo-TEM.
J Struct Biol. 2012 Jul;179(1):68-75. doi: 10.1016/j.jsb.2012.04.020. Epub 2012 May 5.
8
A new method for vitrifying samples for cryoEM.
J Struct Biol. 2016 Aug;195(2):190-198. doi: 10.1016/j.jsb.2016.06.001. Epub 2016 Jun 8.
9
Biological Applications at the Cutting Edge of Cryo-Electron Microscopy.
Microsc Microanal. 2018 Aug;24(4):406-419. doi: 10.1017/S1431927618012382.

引用本文的文献

1
High-affinity PQQ import is widespread in Gram-negative bacteria.
Sci Adv. 2025 May 30;11(22):eadr2753. doi: 10.1126/sciadv.adr2753.
3
Expression and Purification of SARS-related Spike Glycoproteins for Cryo-EM Analysis.
Curr Protoc. 2025 Mar;5(3):e70115. doi: 10.1002/cpz1.70115.
5
CryoCrane: an open-source GUI for analyzing cryo-EM screening data sets.
Acta Crystallogr F Struct Biol Commun. 2025 Feb 1;81(Pt 2):62-65. doi: 10.1107/S2053230X25000081. Epub 2025 Jan 13.
8
Comprehensive microcrystal electron diffraction sample preparation for cryo-EM.
Nat Protoc. 2025 May;20(5):1275-1309. doi: 10.1038/s41596-024-01088-7. Epub 2024 Dec 20.
9
Methods to Study Poxvirus Structures by Cryo-EM Imaging Modalities.
Methods Mol Biol. 2025;2860:191-218. doi: 10.1007/978-1-0716-4160-6_13.
10
Practical Guide for Implementing Cryogenic Electron Microscopy Structure Determination in Dermatology Research.
J Invest Dermatol. 2025 Jan;145(1):22-31. doi: 10.1016/j.jid.2024.10.594. Epub 2024 Nov 26.

本文引用的文献

1
Single particle electron cryomicroscopy: trends, issues and future perspective.
Q Rev Biophys. 2016 Jan;49:e13. doi: 10.1017/S0033583516000068. Epub 2016 Jul 22.
2
An introduction to sample preparation and imaging by cryo-electron microscopy for structural biology.
Methods. 2016 May 1;100:3-15. doi: 10.1016/j.ymeth.2016.02.017. Epub 2016 Feb 28.
3
Structure of transcribing mammalian RNA polymerase II.
Nature. 2016 Jan 28;529(7587):551-4. doi: 10.1038/nature16482. Epub 2016 Jan 20.
4
Progress towards an optimal specimen support for electron cryomicroscopy.
Curr Opin Struct Biol. 2016 Apr;37:81-9. doi: 10.1016/j.sbi.2015.12.007. Epub 2016 Jan 14.
5
Ultrastable gold substrates: Properties of a support for high-resolution electron cryomicroscopy of biological specimens.
J Struct Biol. 2016 Jan;193(1):33-44. doi: 10.1016/j.jsb.2015.11.006. Epub 2015 Nov 22.
6
Mechanism of eIF6 release from the nascent 60S ribosomal subunit.
Nat Struct Mol Biol. 2015 Nov;22(11):914-9. doi: 10.1038/nsmb.3112. Epub 2015 Oct 19.
7
FEI's direct electron detector developments: Embarking on a revolution in cryo-TEM.
J Struct Biol. 2015 Nov;192(2):179-87. doi: 10.1016/j.jsb.2015.09.014. Epub 2015 Oct 9.
8
Factors that Influence the Formation and Stability of Thin, Cryo-EM Specimens.
Biophys J. 2016 Feb 23;110(4):749-55. doi: 10.1016/j.bpj.2015.07.050. Epub 2015 Sep 17.
9
Evaluation of super-resolution performance of the K2 electron-counting camera using 2D crystals of aquaporin-0.
J Struct Biol. 2015 Nov;192(2):163-73. doi: 10.1016/j.jsb.2015.08.015. Epub 2015 Aug 28.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验