Zachariah Sherin, Kumari Prabla, Das Subrata K
Institute of Life Sciences, Department of Biotechnology, Nalco Square, Bhubaneswar-751 023, India.
Int J Syst Evol Microbiol. 2016 Dec;66(12):5091-5098. doi: 10.1099/ijsem.0.001476. Epub 2016 Sep 8.
Two closely related aerobic, Gram-stain-negative, rod-shaped bacteria (S6-60T and S6-67) were isolated from the mucus of the coral, Pocilloporaeydouxi, from the Andaman Sea, India. Heterotrophic growth on marine agar was observed at 4-37 °C and at pH 6.5-10.0; optimum growth occurred at 25-30 °C and at pH 7-9. 16S rRNA gene sequence analysis confirmed that the isolates belong to the genus Psychrobacter; the two isolates shared more than 99.5 % pairwise sequence similarity. Strain S6-60T showed a maximum 16S rRNA similarity of 98.92 % with Psychrobacter pacificensis DSM 23406T. DNA-DNA homology between the two isolates, S6-60T and S6-67, was above 90 %, whereas strain S6-60T showed less than 70 % homology with closely related type species. The DNA G+C content was 47.7 mol%. It contained phosphatidylglycerol, diphosphatidylglycerol, phosphatidylethanolamine and phospholipid as the major polar lipids. C10 : 0, C12 : 0 3OH, C16 : 0, C18 : 1ω9c, C17 : 1ω8c and C16 : 1ω7c were found to be the predominant fatty acids. Based on a polyphasic analysis, the isolates (S6-60T and S6-67) represent a novel species of the genus Psychrobacter for which the name Psychrobacter pocilloporae sp. nov. is proposed with S6-60T(=JCM 31058T=LMG 29157T) as the type strain.
从印度安达曼海的杜氏鹿角珊瑚(Pocillopora eydouxi)黏液中分离出了两种亲缘关系密切的需氧、革兰氏染色阴性、杆状细菌(S6-60T和S6-67)。在4-37 °C和pH 6.5-10.0条件下观察到其在海洋琼脂上的异养生长;最适生长温度为25-30 °C,最适pH为7-9。16S rRNA基因序列分析证实这些分离株属于嗜冷杆菌属;这两个分离株的成对序列相似性超过99.5%。菌株S6-60T与太平洋嗜冷杆菌DSM 23406T的16S rRNA最大相似性为98.92%。两个分离株S6-60T和S6-67之间的DNA-DNA同源性高于90%,而菌株S6-60T与密切相关的模式种的同源性低于70%。DNA G+C含量为47.7 mol%。其主要极性脂质包括磷脂酰甘油、双磷脂酰甘油、磷脂酰乙醇胺和磷脂。发现C10 : 0、C12 : 0 3OH、C16 : 0、C18 : 1ω9c、C17 : 1ω8c和C16 : 1ω7c为主要脂肪酸。基于多相分析,这些分离株(S6-60T和S6-67)代表嗜冷杆菌属的一个新物种,为此提出新名称嗜冷杜氏鹿角珊瑚杆菌(Psychrobacter pocilloporae sp. nov.),以S6-60T(=JCM 31058T=LMG 29157T)作为模式菌株。