Rivera Shannon, Burns Justin L, Vansuch Gregory E, Chica Bryant, Weinert Emily E
Department of Chemistry, Emory University, 1515 Dickey Drive, Atlanta, GA 30322 USA.
Department of Chemistry, Emory University, 1515 Dickey Drive, Atlanta, GA 30322 USA.
J Inorg Biochem. 2016 Nov;164:70-76. doi: 10.1016/j.jinorgbio.2016.08.016. Epub 2016 Aug 27.
Globin coupled sensors (GCS) are O-sensing proteins used by bacteria to monitor the surrounding gaseous environment. To investigate the biphasic O dissociation kinetics observed for full-length GCS proteins, isolated globin domains from Pectobacterium carotovorum ssp. carotovorum (PccGlobin), and Bordetella pertussis (BpeGlobin), have been characterized. PccGlobin is found to be dimeric, while BpeGlobin is monomeric, indicating key differences in the globin domain dimer interface. Through characterization of wild type globin domains and globin variants with mutations at the dimer interface and within the distal pocket, dimerization of the globin domain is demonstrated to correlate with biphasic dissociation kinetics. Furthermore, a distal pocket tyrosine is identified as the primary hydrogen bond donor, while a secondary hydrogen bond donor within the distal heme pocket is involved in conformation(s) that lead to the second O dissociation rate. These findings highlight the role of the globin dimer interface in controlling properties of both the heme pocket and full-length GCS proteins.
珠蛋白偶联传感器(GCS)是细菌用于监测周围气体环境的氧感应蛋白。为了研究全长GCS蛋白观察到的双相氧解离动力学,已对来自胡萝卜软腐果胶杆菌胡萝卜软腐亚种(PccGlobin)和百日咳博德特氏菌(BpeGlobin)的分离珠蛋白结构域进行了表征。发现PccGlobin是二聚体,而BpeGlobin是单体,这表明珠蛋白结构域二聚体界面存在关键差异。通过对野生型珠蛋白结构域以及在二聚体界面和远端口袋内具有突变的珠蛋白变体进行表征,证明珠蛋白结构域的二聚化与双相解离动力学相关。此外,一个远端口袋酪氨酸被确定为主要氢键供体,而远端血红素口袋内的一个次要氢键供体参与导致第二个氧解离速率的构象。这些发现突出了珠蛋白二聚体界面在控制血红素口袋和全长GCS蛋白特性方面的作用。