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CRISPR-Cas系统通过指定间隔序列整合位点来优化其免疫反应。

CRISPR-Cas Systems Optimize Their Immune Response by Specifying the Site of Spacer Integration.

作者信息

McGinn Jon, Marraffini Luciano A

机构信息

Laboratory of Bacteriology, The Rockefeller University, New York, NY 10065, USA.

Laboratory of Bacteriology, The Rockefeller University, New York, NY 10065, USA.

出版信息

Mol Cell. 2016 Nov 3;64(3):616-623. doi: 10.1016/j.molcel.2016.08.038. Epub 2016 Sep 8.

DOI:10.1016/j.molcel.2016.08.038
PMID:27618488
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5096952/
Abstract

CRISPR-Cas systems defend prokaryotes against viruses and plasmids. Short DNA segments of the invader, known as spacers, are stored in the CRISPR array as immunological memories. New spacers are added invariably to the 5' end of the array; therefore, the first spacer matches the latest foreign threat. Whether this highly polarized order of spacer insertion influences CRISPR-Cas immunity has not been explored. Here we show that a conserved sequence located immediately upstream of the CRISPR array specifies the site of new spacer integration. Mutation of this sequence results in erroneous incorporation of new spacers into the middle of the array. We show that spacers added through polarized acquisition give rise to more robust CRISPR-Cas immunity than spacers added to the middle of the array. This study demonstrates that the CRISPR-Cas system specifies the site of spacer integration to optimize the immune response against the most immediate threat to the host.

摘要

CRISPR-Cas系统保护原核生物免受病毒和质粒的侵害。入侵者的短DNA片段,即间隔序列,作为免疫记忆存储在CRISPR阵列中。新的间隔序列总是添加到阵列的5'端;因此,第一个间隔序列与最新的外来威胁相匹配。间隔序列插入的这种高度极化顺序是否影响CRISPR-Cas免疫尚未得到探索。在这里,我们表明位于CRISPR阵列紧邻上游的保守序列指定了新间隔序列整合的位点。该序列的突变导致新的间隔序列错误地掺入阵列中间。我们表明,通过极化获得添加的间隔序列比添加到阵列中间的间隔序列产生更强的CRISPR-Cas免疫。这项研究表明,CRISPR-Cas系统指定间隔序列整合的位点,以优化针对宿主最直接威胁的免疫反应。

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本文引用的文献

1
CRISPR Outsourcing: Commissioning IHF for Site-Specific Integration of Foreign DNA at the CRISPR Array.CRISPR外包:委托整合宿主因子实现外源DNA在CRISPR阵列上的位点特异性整合
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CRISPR Immunological Memory Requires a Host Factor for Specificity.CRISPR 免疫记忆需要宿主因子来保证特异性。
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Co-transcriptional DNA and RNA Cleavage during Type III CRISPR-Cas Immunity.III型CRISPR-Cas免疫过程中的共转录DNA和RNA切割
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Sequences spanning the leader-repeat junction mediate CRISPR adaptation to phage in Streptococcus thermophilus.跨越前导序列-重复序列连接区的序列介导嗜热链球菌中CRISPR对噬菌体的适应性。
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