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断奶仔猪血清微小RNA表达谱分析及其与小肠微小RNA表达谱的比较

Analysis of Serum microRNA Expression Profiles and Comparison with Small Intestinal microRNA Expression Profiles in Weaned Piglets.

作者信息

Tao Xin, Xu Ziwei, Men Xiaoming

机构信息

Institute of Animal Husbandry and Veterinary Science, Zhejiang Academy of Agricultural Sciences, Hangzhou, Zhejiang, China.

出版信息

PLoS One. 2016 Sep 15;11(9):e0162776. doi: 10.1371/journal.pone.0162776. eCollection 2016.

DOI:10.1371/journal.pone.0162776
PMID:27632531
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5025173/
Abstract

Weaning stress induces tissue injuries and impairs health and growth in piglets, especially during the first week post-weaning. MicroRNAs (miRNAs) play vital roles in regulating stresses and diseases. Our previous study found multiple differentially expressed miRNAs in small intestine of piglets at four days post-weaning. To better understand the roles of miRNAs during weaning stress, we analyzed the serum miRNA expressional profile in weaned piglets (at four days post-weaning) and in suckling piglets (control) of the same age using miRNA microarray technology. We detected a total of 300 expressed miRNAs, 179 miRNAs of which were differentially expressed between the two groups. The miRNA microarray results were validated by RT-qPCR. The biological functions of these differentially expressed miRNAs were predicted by GO terms and KEGG pathway annotations. We identified 10 highly expressed miRNAs in weaned piglets including miR-31, miR-205, and miR-21 (upregulated) and miR-144, miR-30c-5p, miR-363, miR-194a, miR-186, miR-150, and miR-194b-5p (downregulated). Additionally, miR-194b-5p expression was significantly downregulated in serum and small intestine of weaned piglets. Our results suggest that weaning stress affects serum miRNA profiles in piglets. And serum miR-194b-5p levels can reflect its expressional changes in small intestine of piglets by weaning stress.

摘要

断奶应激会导致仔猪组织损伤,并损害其健康和生长,尤其是在断奶后的第一周。微小RNA(miRNA)在调节应激和疾病方面发挥着至关重要的作用。我们之前的研究发现,断奶后四天的仔猪小肠中有多种差异表达的miRNA。为了更好地了解miRNA在断奶应激中的作用,我们使用miRNA微阵列技术分析了断奶仔猪(断奶后四天)和同年龄哺乳仔猪(对照)的血清miRNA表达谱。我们共检测到300个表达的miRNA,其中179个miRNA在两组之间差异表达。miRNA微阵列结果通过RT-qPCR进行了验证。通过基因本体论(GO)术语和京都基因与基因组百科全书(KEGG)通路注释预测了这些差异表达miRNA的生物学功能。我们在断奶仔猪中鉴定出10个高表达的miRNA,包括miR-31、miR-205和miR-21(上调)以及miR-144、miR-30c-5p、miR-363、miR-194a、miR-186、miR-150和miR-194b-5p(下调)。此外,miR-194b-5p在断奶仔猪的血清和小肠中的表达显著下调。我们的数据表明,断奶应激会影响仔猪的血清miRNA谱。并且血清miR-194b-5p水平可以反映断奶应激对仔猪小肠中其表达的影响。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a4f9/5025173/f2c0a775cf44/pone.0162776.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a4f9/5025173/52e09cfa9a71/pone.0162776.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a4f9/5025173/609ee274243d/pone.0162776.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a4f9/5025173/f2c0a775cf44/pone.0162776.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a4f9/5025173/52e09cfa9a71/pone.0162776.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a4f9/5025173/609ee274243d/pone.0162776.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a4f9/5025173/f2c0a775cf44/pone.0162776.g003.jpg

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