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乳酸乳球菌乳亚种A12的全基因组序列，该菌株从酸面圈中分离得到

Complete Genome Sequence of Lactococcus lactis subsp. lactis A12, a Strain Isolated from Wheat Sourdough.

作者信息

Guellerin Maéva, Passerini Delphine, Fontagné-Faucher Catherine, Robert Hervé, Gabriel Valérie, Loux Valentin, Klopp Christophe, Le Loir Yves, Coddeville Michèle, Daveran-Mingot Marie-Line, Ritzenthaler Paul, Le Bourgeois Pascal

机构信息

Université de Toulouse, Université Paul Sabatier, Toulouse, France CNRS, UMR 5100, Toulouse, France.

Université de Toulouse, Université Paul Sabatier, Toulouse, France CNRS, UMR 5100, Toulouse, France Université de Toulouse, INSA, UPS, INP, Toulouse, France INRA, UMR792, Ingénierie des Systèmes Biologiques et des Procédés, Toulouse, France CNRS, UMR5504, Toulouse, France.

出版信息

Genome Announc. 2016 Sep 15;4(5):e00692-16. doi: 10.1128/genomeA.00692-16.

DOI:10.1128/genomeA.00692-16
PMID:27634985
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5026425/
Abstract

We report here the complete genome sequence of Lactococcus lactis subsp. lactis strain A12, a strain isolated from sourdough. The circular chromosome and the four plasmids reveal genes involved in carbohydrate metabolism that are potentially required for the persistence of this strain in such a complex ecosystem.

摘要

我们在此报告乳酸乳球菌乳酸亚种A12菌株的全基因组序列，该菌株是从酸面团中分离得到的。环状染色体和四个质粒揭示了参与碳水化合物代谢的基因，这些基因可能是该菌株在如此复杂的生态系统中持续存在所必需的。

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本文引用的文献

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The carbohydrate metabolism signature of lactococcus lactis strain A12 reveals its sourdough ecosystem origin.乳球菌 A12 菌株的碳水化合物代谢特征揭示了其酸面团生态系统的起源。
Appl Environ Microbiol. 2013 Oct;79(19):5844-52. doi: 10.1128/AEM.01560-13. Epub 2013 Jul 19.
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NG6: Integrated next generation sequencing storage and processing environment.NG6：集成下一代测序存储和处理环境。
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Genes but not genomes reveal bacterial domestication of Lactococcus lactis.基因而非基因组揭示乳球菌的细菌驯化。
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Biodiversity of lactic acid bacteria in French wheat sourdough as determined by molecular characterization using species-specific PCR.通过使用种特异性PCR的分子表征确定的法国小麦酸面团中乳酸菌的生物多样性。
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Optical mapping as a routine tool for bacterial genome sequence finishing.光学图谱作为细菌基因组序列完成的常规工具。
BMC Genomics. 2007 Sep 14;8:321. doi: 10.1186/1471-2164-8-321.
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AGMIAL: implementing an annotation strategy for prokaryote genomes as a distributed system.AGMIAL：作为分布式系统为原核生物基因组实施注释策略。
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