产组胺和不产组胺的发光杆菌菌株的基因组序列草图
Draft Genome Sequences of Histamine- and Non-Histamine-Producing Photobacterium Strains.
作者信息
Bjornsdottir-Butler Kristin, Sanchez Leon Maria, Dunlap Paul V, Benner Ronald A
机构信息
FDA, Division of Seafood Science and Technology, Gulf Coast Seafood Laboratory, Dauphin Island, Alabama, USA
FDA, Division of Public Health Informatics and Analytics, College Park, Maryland, USA.
出版信息
Genome Announc. 2016 Sep 22;4(5):e01008-16. doi: 10.1128/genomeA.01008-16.
Abstract
Histamine-producing bacteria (HPBs) have recently been identified from the marine environment. The identification and characterization of HPBs is important to developing effective mitigation strategies for scombrotoxin fish poisoning. We report here the draft genomes of seven histamine-producing and two non-histamine-producing marine Photobacterium strains.
摘要
产组胺细菌（HPBs）最近已从海洋环境中被鉴定出来。HPBs的鉴定和特征分析对于制定有效的组胺中毒鱼类中毒缓解策略很重要。我们在此报告七株产组胺和两株不产组胺的海洋发光杆菌菌株的基因组草图。
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J Food Prot. 2015 Jul;78(7):1335-42. doi: 10.4315/0362-028X.JFP-15-012.
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