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血清细胞外囊泡中的DNA在不同储存条件下是稳定的。

DNA in serum extracellular vesicles is stable under different storage conditions.

作者信息

Jin Yang, Chen Keyan, Wang Zongying, Wang Yan, Liu Jianzhi, Lin Li, Shao Yong, Gao Lihua, Yin Huihui, Cui Cong, Tan Zhaoli, Liu Liejun, Zhao Chuanhua, Zhang Gairong, Jia Ru, Du Lijuan, Chen Yuling, Liu Rongrui, Xu Jianming, Hu Xianwen, Wang Youliang

机构信息

Laboratory of Cell Engineering, Institute of Biotechnology, Beijing, China.

Affiliated Hospital Cancer Center, Academy of Military Medical Sciences, Beijing, China.

出版信息

BMC Cancer. 2016 Sep 23;16(1):753. doi: 10.1186/s12885-016-2783-2.

Abstract

BACKGROUND

Extracellular vesicles (EVs), including exosomes, microvesicles, and apoptotic bodies, can be secreted by most cell types and released in perhaps all biological fluids. EVs contain multiple proteins, specific lipids and several kinds of nucleic acids such as RNAs and DNAs. Studies have found that EVs contain double-stranded DNA and that genetic information has a certain degree of consistency with tumor DNA. Therefore, if genes that exist in exosomes are stable, we may be able to use EVs genetic testing as a new means to monitor gene mutation.

METHODS

In this study, EVs were extracted from serum under various storage conditions (4 °C, room temperature and repeated freeze-thaw). We used western blotting to examine the stability of serum EVs. Then, we extracted DNA from EVs and tested the concentration changing under different conditions. We further assessed the stability of EVs DNA s using polymerase chain reaction (PCR) and Sanger sequencing.

RESULTS

EVs is stable under the conditions of 4 °C (for 24 h, 72 h, 168 h), room temperature (for 6 h, 12 h, 24 h, 48 h) and repeated freeze-thaw (after one time, three times, five times). Also, serum DNA is mainly present in EVs, especially in exosomes, and that the content and function of DNA in EVs is stable whether in a changing environment or not. We showed that EVs DNA stayed stable for 1 week at 4 °C, 1 day at room temperature and after repeated freeze-thaw cycles (less than three times). However, DNA from serum EVs after 2 days at room temperature or after five repeated freeze-thaw cycles could be used for PCR and sequencing.

CONCLUSIONS

Serum EVs and EVs DNA can remain stable under different environments, which is the premise that EVs could serve as a novel means for genetic tumor detection and potential biomarkers for cancer diagnostics and prognostics.

摘要

背景

细胞外囊泡(EVs),包括外泌体、微囊泡和凋亡小体,可由大多数细胞类型分泌,并可能释放到所有生物体液中。EVs包含多种蛋白质、特定脂质以及几种核酸,如RNA和DNA。研究发现,EVs含有双链DNA,且遗传信息与肿瘤DNA具有一定程度的一致性。因此,如果外泌体中存在的基因是稳定的,我们或许能够将EVs基因检测作为监测基因突变的一种新手段。

方法

在本研究中,在各种储存条件(4℃、室温以及反复冻融)下从血清中提取EVs。我们使用蛋白质免疫印迹法检测血清EVs的稳定性。然后,我们从EVs中提取DNA,并检测不同条件下浓度的变化。我们进一步使用聚合酶链反应(PCR)和桑格测序评估EVs DNA的稳定性。

结果

EVs在4℃(24小时、72小时、168小时)、室温(6小时、12小时、24小时、48小时)以及反复冻融(一次、三次、五次后)条件下是稳定的。此外,血清DNA主要存在于EVs中,尤其是在外泌体中,并且无论环境是否变化,EVs中DNA的含量和功能都是稳定的。我们发现,EVs DNA在4℃下可稳定保存1周,在室温下可稳定保存1天,在反复冻融循环(少于三次)后也能保持稳定。然而,室温放置2天后或经过五次反复冻融循环后的血清EVs DNA仍可用于PCR和测序。

结论

血清EVs和EVs DNA在不同环境下均可保持稳定,这是EVs能够作为肿瘤基因检测的新手段以及癌症诊断和预后潜在生物标志物的前提。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bd9a/5035490/9a5c24dc69d4/12885_2016_2783_Fig1_HTML.jpg

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