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水不可及蛋白的体外和原位的 H 检测固态 NMR 研究。

H-Detected Solid-State NMR Studies of Water-Inaccessible Proteins In Vitro and In Situ.

机构信息

NMR Spectroscopy, Bijvoet Center for Biomolecular Research, Department of Chemistry, Utrecht University, Pandualaan 8, 3584 CH, Utrecht, The Netherlands.

出版信息

Angew Chem Int Ed Engl. 2016 Oct 17;55(43):13606-13610. doi: 10.1002/anie.201606594. Epub 2016 Sep 27.

DOI:10.1002/anie.201606594
PMID:27671832
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5113794/
Abstract

H detection can significantly improve solid-state NMR spectral sensitivity and thereby allows studying more complex proteins. However, the common prerequisite for H detection is the introduction of exchangeable protons in otherwise deuterated proteins, which has thus far significantly hampered studies of partly water-inaccessible proteins, such as membrane proteins. Herein, we present an approach that enables high-resolution H-detected solid-state NMR (ssNMR) studies of water-inaccessible proteins, and that even works in highly complex environments such as cellular surfaces. In particular, the method was applied to study the K channel KcsA in liposomes and in situ in native bacterial cell membranes. We used our data for a dynamic analysis, and we show that the selectivity filter, which is responsible for ion conduction and highly conserved in K channels, undergoes pronounced molecular motion. We expect this approach to open new avenues for biomolecular ssNMR.

摘要

H 检测可以显著提高固态 NMR 光谱灵敏度,从而可以研究更复杂的蛋白质。然而,H 检测的常见前提条件是在其他氘代蛋白质中引入可交换的质子,这迄今为止极大地阻碍了对部分水不可及的蛋白质(例如膜蛋白)的研究。在此,我们提出了一种方法,该方法能够对水不可及的蛋白质进行高分辨率的 H 检测固态 NMR(ssNMR)研究,即使在高度复杂的环境中(例如细胞表面)也能工作。 特别是,该方法应用于研究脂质体和天然细菌细胞膜中 K 通道 KcsA。我们使用我们的数据进行了动态分析,结果表明,负责离子传导且在 K 通道中高度保守的选择性过滤器会发生明显的分子运动。我们期望这种方法为生物分子 ssNMR 开辟新途径。

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