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人类胶原蛋白α1(XIII)链基因(COL13A1)定位于10号染色体的q22区域。

Assignment of the human collagen alpha 1 (XIII) chain gene (COL13A1) to the q22 region of chromosome 10.

作者信息

Shows T B, Tikka L, Byers M G, Eddy R L, Haley L L, Henry W M, Prockop D J, Tryggvason K

机构信息

Department of Human Genetics, Roswell Park Memorial Institute, Buffalo, New York 14263.

出版信息

Genomics. 1989 Jul;5(1):128-33. doi: 10.1016/0888-7543(89)90096-7.

DOI:10.1016/0888-7543(89)90096-7
PMID:2767682
Abstract

Type XIII collagen is a recently described collagen that resembles in structure the short-chain collagens of types IX, X, and XII. Unlike any other collagen, the type XIII is found in several different forms generated through alternative splicing. A 2.0-kb genomic fragment from the human alpha 1 (XIII) collagen gene was isolated and shown by DNA sequencing to contain exon 12 as counted from the 3' end. This fragment was used as a probe to localize the gene. The gene (COL13A1) was assigned to chromosome 10 by hybridization of the probe to DNA isolated from a panel of human-mouse somatic cell hybrids containing different human chromosomes. Furthermore, the gene was mapped to the q22 region by in situ hybridization to metaphase chromosomes.

摘要

ⅩⅢ型胶原是一种最近被描述的胶原,其结构类似于Ⅸ型、Ⅹ型和Ⅻ型短链胶原。与其他任何胶原不同,ⅩⅢ型胶原以几种通过可变剪接产生的不同形式存在。从人α1(ⅩⅢ)胶原基因中分离出一个2.0kb的基因组片段,并通过DNA测序显示其包含从3'端起计数的第12外显子。该片段用作探针来定位该基因。通过将该探针与从一组包含不同人类染色体的人-鼠体细胞杂种中分离的DNA杂交,将该基因(COL13A1)定位于10号染色体。此外,通过与中期染色体的原位杂交,将该基因定位到q22区域。

相似文献

1
Assignment of the human collagen alpha 1 (XIII) chain gene (COL13A1) to the q22 region of chromosome 10.人类胶原蛋白α1(XIII)链基因(COL13A1)定位于10号染色体的q22区域。
Genomics. 1989 Jul;5(1):128-33. doi: 10.1016/0888-7543(89)90096-7.
2
Assignment of the gene coding for the alpha 1 chain of collagen type XIII (COL13A1) to human chromosome region 10q11----qter.将编码 XIII 型胶原蛋白α1 链(COL13A1)的基因定位于人类染色体区域 10q11----qter。
Cytogenet Cell Genet. 1989;52(3-4):190-3. doi: 10.1159/000132875.
3
Complete exon-intron organization and chromosomal location of the gene for mouse type XIII collagen (col13a1) and comparison with its human homologue.小鼠ⅩⅢ型胶原蛋白(col13a1)基因的完整外显子-内含子结构及染色体定位,及其与人类同源基因的比较。
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The mouse alpha 1(XII) and human alpha 1(XII)-like collagen genes are localized on mouse chromosome 9 and human chromosome 6.小鼠α1(XII)胶原蛋白基因和人α1(XII)样胶原蛋白基因分别定位于小鼠第9号染色体和人类第6号染色体上。
Genomics. 1992 Oct;14(2):225-31. doi: 10.1016/s0888-7543(05)80210-1.
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Cloning of the human and mouse type X collagen genes and mapping of the mouse type X collagen gene to chromosome 10.人类和小鼠X型胶原蛋白基因的克隆以及小鼠X型胶原蛋白基因在染色体10上的定位。
Eur J Biochem. 1992 May 15;206(1):217-24. doi: 10.1111/j.1432-1033.1992.tb16919.x.
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Chromosomal assignment of a gene encoding a new collagen type (COL15A1) to 9q21 --> q22.一个编码新型胶原蛋白(COL15A1)的基因在染色体上的定位为9q21→q22 。
Genomics. 1992 Oct;14(2):220-4. doi: 10.1016/s0888-7543(05)80209-5.
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Molecular cloning of the human alpha 2(IX) collagen cDNA and assignment of the human COL9A2 gene to chromosome 1.人类α2(IX)胶原蛋白cDNA的分子克隆及人类COL9A2基因在1号染色体上的定位。
FEBS Lett. 1993 Mar 15;319(1-2):177-80. doi: 10.1016/0014-5793(93)80062-y.
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Isolation of region-specific cosmids by hybridization with microdissection clones from human chromosome 10q11.1-q21.1.通过与人10号染色体10q11.1 - q21.1的显微切割克隆杂交分离区域特异性黏粒。
Genomics. 1993 Aug;17(2):449-55. doi: 10.1006/geno.1993.1346.
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The human alpha 2(XI) collagen (COL11A2) chain. Molecular cloning of cDNA and genomic DNA reveals characteristics of a fibrillar collagen with differences in genomic organization.人α2(XI)型胶原蛋白(COL11A2)链。cDNA和基因组DNA的分子克隆揭示了一种纤维状胶原蛋白的特征以及基因组组织上的差异。
J Biol Chem. 1989 Aug 15;264(23):13910-6.

引用本文的文献

1
Lack of cytosolic and transmembrane domains of type XIII collagen results in progressive myopathy.缺乏 XIII 型胶原蛋白的胞质域和跨膜域会导致进行性肌病。
Am J Pathol. 2001 Oct;159(4):1581-92. doi: 10.1016/S0002-9440(10)62542-4.
2
Assignment of the gene coding for the alpha-subunit of prolyl 4-hydroxylase to human chromosome region 10q21.3-23.1.脯氨酰4-羟化酶α亚基编码基因定位于人类染色体10q21.3 - 23.1区域。
Am J Hum Genet. 1989 Dec;45(6):829-34.
3
Molecular cloning of alpha 5(IV) collagen and assignment of the gene to the region of the X chromosome containing the Alport syndrome locus.
α5(IV)胶原蛋白的分子克隆及该基因在含有奥尔波特综合征基因座的X染色体区域的定位。
Am J Hum Genet. 1990 Jun;46(6):1024-33.
4
Comparative map for mice and humans.小鼠与人类的比较图谱。
Mamm Genome. 1991;1 Spec No:S461-515. doi: 10.1007/BF00656504.
5
Comparative map for mice and humans.小鼠与人类的比较图谱。
Mamm Genome. 1992;3(9):480-536. doi: 10.1007/BF00778825.