Kumar Sanjeev, Prakash Sunita, Gupta Kallol, Dongre Aparna, Balaram Padmanabhan, Balaram Hemalatha
Molecular Biology and Genetics Unit, Jawaharlal Nehru Centre for Advanced Scientific Research, Jakkur, Bangalore 560064, India.
Molecular Biophysics Unit, Indian Institute of Science, Bangalore 560012, India.
Nat Commun. 2016 Sep 28;7:12798. doi: 10.1038/ncomms12798.
Protein ageing is often mediated by the formation of succinimide intermediates. These short-lived intermediates derive from asparaginyl deamidation and aspartyl dehydration and are rapidly converted into β-aspartyl or D-aspartyl residues. Here we report the presence of a highly stable succinimide intermediate in the glutaminase subunit of GMP synthetase from the hyperthermophile Methanocaldoccocus jannaschii. By comparing the biophysical properties of the wild-type protein and of several mutants, we show that the presence of succinimide increases the structural stability of the glutaminase subunit. The protein bearing this modification in fact remains folded at 100 °C and in 8 M guanidinium chloride. Mutation of the residue following the reactive asparagine provides insight into the factors that contribute to the hydrolytic stability of the succinimide. Our findings suggest that sequences that stabilize succinimides from hydrolysis may be evolutionarily selected to confer extreme thermal stability.
蛋白质老化通常由琥珀酰亚胺中间体的形成介导。这些短命的中间体源自天冬酰胺脱酰胺作用和天冬氨酸脱水作用,并迅速转化为β-天冬氨酰或D-天冬氨酰残基。在此,我们报道了来自嗜热古菌詹氏甲烷球菌的GMP合成酶谷氨酰胺酶亚基中存在一种高度稳定的琥珀酰亚胺中间体。通过比较野生型蛋白和几个突变体的生物物理特性,我们表明琥珀酰亚胺的存在增加了谷氨酰胺酶亚基的结构稳定性。事实上,带有这种修饰的蛋白质在100°C和8M氯化胍中仍保持折叠状态。对反应性天冬酰胺之后的残基进行突变,有助于深入了解有助于琥珀酰亚胺水解稳定性的因素。我们的研究结果表明,稳定琥珀酰亚胺不被水解的序列可能在进化过程中被选择,以赋予极端的热稳定性。