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姐妹细胞色素 P450 基因之间的进化相互作用塑造了植物代谢的可塑性。

Evolutionary interplay between sister cytochrome P450 genes shapes plasticity in plant metabolism.

机构信息

Institute of Plant Molecular Biology, CNRS, University of Strasbourg, 12 rue du Général Zimmer, Strasbourg 67084 France.

Université Lyon 1, CNRS, UMR 5558, Laboratoire de Biométrie et Biologie Évolutive, 16 rue Raphael Dubois, 69622 Villeurbanne Cedex, France.

出版信息

Nat Commun. 2016 Oct 7;7:13026. doi: 10.1038/ncomms13026.

Abstract

Expansion of the cytochrome P450 gene family is often proposed to have a critical role in the evolution of metabolic complexity, in particular in microorganisms, insects and plants. However, the molecular mechanisms underlying the evolution of this complexity are poorly understood. Here we describe the evolutionary history of a plant P450 retrogene, which emerged and underwent fixation in the common ancestor of Brassicales, before undergoing tandem duplication in the ancestor of Brassicaceae. Duplication leads first to gain of dual functions in one of the copies. Both sister genes are retained through subsequent speciation but eventually return to a single copy in two of three diverging lineages. In the lineage in which both copies are maintained, the ancestral functions are split between paralogs and a novel function arises in the copy under relaxed selection. Our work illustrates how retrotransposition and gene duplication can favour the emergence of novel metabolic functions.

摘要

细胞色素 P450 基因家族的扩张通常被认为在代谢复杂性的进化中起着关键作用,特别是在微生物、昆虫和植物中。然而,这种复杂性进化的分子机制还知之甚少。在这里,我们描述了一个植物 P450 返座基因的进化历史,该基因在芸薹目植物的共同祖先中出现并固定下来,然后在芸薹科植物的祖先中发生串联重复。重复首先导致其中一个拷贝获得双重功能。两个姐妹基因通过随后的物种形成保留下来,但最终在三个分歧谱系中的两个谱系中恢复为单个拷贝。在两个拷贝都被保留的谱系中,祖先功能在旁系同源物之间分裂,而一个新功能在选择放松的拷贝中出现。我们的工作说明了反转录转座和基因重复如何促进新代谢功能的出现。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3840/5059761/a4e4536f776b/ncomms13026-f1.jpg

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