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ZMYND8与NuRD在靶基因上共定位,并调节GATAD2A/NuRD依赖于聚(ADP-核糖)的DNA损伤位点募集。

ZMYND8 Co-localizes with NuRD on Target Genes and Regulates Poly(ADP-Ribose)-Dependent Recruitment of GATAD2A/NuRD to Sites of DNA Damage.

作者信息

Spruijt Cornelia G, Luijsterburg Martijn S, Menafra Roberta, Lindeboom Rik G H, Jansen Pascal W T C, Edupuganti Raghu Ram, Baltissen Marijke P, Wiegant Wouter W, Voelker-Albert Moritz C, Matarese Filomena, Mensinga Anneloes, Poser Ina, Vos Harmjan R, Stunnenberg Hendrik G, van Attikum Haico, Vermeulen Michiel

机构信息

Department of Molecular Cancer Research, University Medical Center Utrecht, 3584 CG Utrecht, the Netherlands; Department of Molecular Biology, Faculty of Science, Radboud Institute for Molecular Life Sciences, Radboud University Nijmegen, 6525 GA Nijmegen, the Netherlands.

Department of Human Genetics, Leiden University Medical Center, 2333 ZC Leiden, the Netherlands.

出版信息

Cell Rep. 2016 Oct 11;17(3):783-798. doi: 10.1016/j.celrep.2016.09.037.

Abstract

NuRD (nucleosome remodeling and histone deacetylase) is a versatile multi-protein complex with roles in transcription regulation and the DNA damage response. Here, we show that ZMYND8 bridges NuRD to a number of putative DNA-binding zinc finger proteins. The MYND domain of ZMYND8 directly interacts with PPPLΦ motifs in the NuRD subunit GATAD2A. Both GATAD2A and GATAD2B exclusively form homodimers and define mutually exclusive NuRD subcomplexes. ZMYND8 and NuRD share a large number of genome-wide binding sites, mostly active promoters and enhancers. Depletion of ZMYND8 does not affect NuRD occupancy genome-wide and only slightly affects expression of NuRD/ZMYND8 target genes. In contrast, the MYND domain in ZMYND8 facilitates the rapid, poly(ADP-ribose)-dependent recruitment of GATAD2A/NuRD to sites of DNA damage to promote repair by homologous recombination. Thus, these results show that a specific substoichiometric interaction with a NuRD subunit paralogue provides unique functionality to distinct NuRD subcomplexes.

摘要

核小体重塑与组蛋白去乙酰化酶(NuRD)是一种多功能的多蛋白复合物,在转录调控和DNA损伤反应中发挥作用。在此,我们表明ZMYND8将NuRD与许多假定的DNA结合锌指蛋白联系起来。ZMYND8的MYND结构域直接与NuRD亚基GATAD2A中的PPPLΦ基序相互作用。GATAD2A和GATAD2B均仅形成同二聚体,并定义了相互排斥的NuRD亚复合物。ZMYND8和NuRD共享大量全基因组结合位点,主要是活性启动子和增强子。ZMYND8的缺失不影响全基因组范围内NuRD的占据情况,仅轻微影响NuRD/ZMYND8靶基因的表达。相反,ZMYND8中的MYND结构域促进GATAD2A/NuRD快速、聚(ADP - 核糖)依赖性地募集到DNA损伤位点,以通过同源重组促进修复。因此,这些结果表明,与NuRD亚基旁系同源物的特定亚化学计量相互作用为不同的NuRD亚复合物提供了独特的功能。

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