Rodríguez-Bolaños Monica, Cabrera Nallely, Perez-Montfort Ruy
Departamento de Bioquímica y Biología Estructural, Instituto de Fisiología Celular, Universidad Nacional Autónoma de México, Av. Universidad 3000, Coyoacán, 04510 México DF, México.
Departamento de Bioquímica y Biología Estructural, Instituto de Fisiología Celular, Universidad Nacional Autónoma de México, Av. Universidad 3000, Coyoacán, 04510 México DF, México
Open Biol. 2016 Oct;6(10). doi: 10.1098/rsob.160161.
The reactivation of triosephosphate isomerase (TIM) from unfolded monomers induced by guanidine hydrochloride involves different amino acids of its sequence in different stages of protein refolding. We describe a systematic mutagenesis method to find critical residues for certain physico-chemical properties of a protein. The two similar TIMs of Trypanosoma brucei and Trypanosoma cruzi have different reactivation velocities and efficiencies. We used a small number of chimeric enzymes, additive mutants and planned site-directed mutants to produce an enzyme from T. brucei with 13 mutations in its sequence, which reactivates fast and efficiently like wild-type (WT) TIM from T. cruzi, and another enzyme from T. cruzi, with 13 slightly altered mutations, which reactivated slowly and inefficiently like the WT TIM of T. brucei Our method is a shorter alternative to random mutagenesis, saturation mutagenesis or directed evolution to find multiple amino acids critical for certain properties of proteins.
由盐酸胍诱导的磷酸丙糖异构酶(TIM)从解折叠单体的重新激活在蛋白质重折叠的不同阶段涉及到其序列中的不同氨基酸。我们描述了一种系统诱变方法,以找到对蛋白质某些物理化学性质至关重要的残基。布氏锥虫和克氏锥虫的两种相似的TIM具有不同的重新激活速度和效率。我们使用了少量嵌合酶、加性突变体和计划的定点突变体,产生了一种来自布氏锥虫的酶,其序列中有13个突变,其重新激活速度快且效率高,类似于来自克氏锥虫的野生型(WT)TIM;以及另一种来自克氏锥虫的酶,有13个略有改变的突变,其重新激活缓慢且效率低,类似于布氏锥虫的WT TIM。我们的方法是一种比随机诱变、饱和诱变或定向进化更短的替代方法,用于找到对蛋白质某些性质至关重要的多个氨基酸。