从巨芒草中分离出的三株荧光假单胞菌内生菌株的基因组序列草图
Draft Genome Sequence of Three Endophyte Strains of Pseudomonas fluorescens Isolated from Miscanthus giganteus.
作者信息
Moreira António S, Germaine Kieran J, Lloyd Andrew, Lally Richard D, Galbally Paul T, Ryan David, Dowling David N
机构信息
EnviroCORE, Institute of Technology Carlow, Carlow, Ireland.
EnviroCORE, Institute of Technology Carlow, Carlow, Ireland
出版信息
Genome Announc. 2016 Oct 13;4(5):e00965-16. doi: 10.1128/genomeA.00965-16.
Abstract
We report here the draft genome sequence of three Pseudomonas fluorescens strains (L111, L228, and L321) isolated from Miscanthus giganteus The draft genome analyses uncovered a group of genes involved in the biosynthesis of secondary metabolites and for plant growth promotion.
摘要
我们在此报告从巨芒草中分离出的三株荧光假单胞菌菌株（L111、L228和L321）的基因组序列草图。基因组序列草图分析发现了一组参与次生代谢物生物合成和促进植物生长的基因。
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本文引用的文献
1
SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing.SPAdes：一种新的基因组组装算法及其在单细胞测序中的应用
J Comput Biol. 2012 May;19(5):455-77. doi: 10.1089/cmb.2012.0021. Epub 2012 Apr 16.
2
Fluorescent pseudomonads as biocontrol agents for sustainable agricultural systems.荧光假单胞菌作为可持续农业系统的生物防治剂。
Res Microbiol. 2010 Jul-Aug;161(6):464-71. doi: 10.1016/j.resmic.2010.04.007. Epub 2010 May 10.
3
Genomic and genetic analyses of diversity and plant interactions of Pseudomonas fluorescens.荧光假单胞菌的多样性及植物相互作用的基因组和遗传分析。
Genome Biol. 2009;10(5):R51. doi: 10.1186/gb-2009-10-5-r51. Epub 2009 May 11.
4
Bacterial endophytes: recent developments and applications.细菌内生菌：最新进展与应用
FEMS Microbiol Lett. 2008 Jan;278(1):1-9. doi: 10.1111/j.1574-6968.2007.00918.x. Epub 2007 Nov 21.
5
BASys: a web server for automated bacterial genome annotation.BASys：一个用于细菌基因组自动注释的网络服务器。
Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W455-9. doi: 10.1093/nar/gki593.
6
Basic local alignment search tool.基本局部比对搜索工具
J Mol Biol. 1990 Oct 5;215(3):403-10. doi: 10.1016/S0022-2836(05)80360-2.
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