荧光假单胞菌菌株SF39a和SF4c的基因组序列草图，潜在的植物生长促进剂和生物防治剂
Draft Genome Sequences of Pseudomonas fluorescens Strains SF39a and SF4c, Potential Plant Growth Promotion and Biocontrol Agents.
作者信息
Ly Lindsey K, Underwood Grace E, McCully Lucy M, Bitzer Adam S, Godino Agustina, Bucci Vanni, Brigham Christopher J, Príncipe Analía, Fischer Sonia E, Silby Mark W
机构信息
Department of Biology, University of Massachusetts Dartmouth, North Dartmouth, Massachusetts, USA.
Facultad de Ciencias Exactas, Físico-Químicas y Naturales, Universidad Nacional de Río Cuarto, Río Cuarto, Córdoba, Argentina.
出版信息
Genome Announc. 2015 Mar 26;3(2):e00219-15. doi: 10.1128/genomeA.00219-15.
Abstract
Pseudomonas fluorescens SF4c and SF39a, strains isolated from wheat rhizosphere, have potential applications in plant growth promotion and biocontrol of fungal diseases of crop plants. We report the draft genome sequences of SF4c and SF39a with estimated sizes of 6.5 Mb and 5.9 Mb, respectively.
摘要
荧光假单胞菌SF4c和SF39a是从小麦根际分离出的菌株，在促进植物生长和对农作物真菌病害的生物防治方面具有潜在应用价值。我们报告了SF4c和SF39a的基因组草图序列，估计大小分别为6.5兆碱基对和5.9兆碱基对。
相似文献
1
Draft Genome Sequences of Pseudomonas fluorescens Strains SF39a and SF4c, Potential Plant Growth Promotion and Biocontrol Agents.
Genome Announc. 2015 Mar 26;3(2):e00219-15. doi: 10.1128/genomeA.00219-15.
2
A ptsP deficiency in PGPR Pseudomonas fluorescens SF39a affects bacteriocin production and bacterial fitness in the wheat rhizosphere.
Res Microbiol. 2016 Apr;167(3):178-89. doi: 10.1016/j.resmic.2015.12.003. Epub 2015 Dec 18.
3
Characterization of a phage-like pyocin from the plant growth-promoting rhizobacterium Pseudomonas fluorescens SF4c.
Microbiology (Reading). 2012 Jun;158(Pt 6):1493-1503. doi: 10.1099/mic.0.056002-0. Epub 2012 Mar 22.
4
Genome Comparison of UM270 with Related Fluorescent Strains Unveils Genes Involved in Rhizosphere Competence and Colonization.
J Genomics. 2017 Aug 24;5:91-98. doi: 10.7150/jgen.21588. eCollection 2017.
5
Draft Genome Sequences of Pseudomonas fluorescens Strains PA4C2 and PA3G8 and Pseudomonas putida PA14H7, Three Biocontrol Bacteria against Dickeya Phytopathogens.
Genome Announc. 2015 Jan 29;3(1):e01503-14. doi: 10.1128/genomeA.01503-14.
6
Draft Genome Sequence of the Biocontrol and Plant Growth-Promoting Rhizobacterium Pseudomonas fluorescens strain UM270.
Stand Genomic Sci. 2016 Jan 13;11:5. doi: 10.1186/s40793-015-0123-9. eCollection 2016.
7
Bio-protective microbial agents from rhizosphere eco-systems trigger plant defense responses provide protection against sheath blight disease in rice (Oryza sativa L.).
Microbiol Res. 2016 Nov;192:300-312. doi: 10.1016/j.micres.2016.08.007. Epub 2016 Aug 6.
8
Effect of a Pseudomonas fluorescens tailocin against phytopathogenic Xanthomonas observed by atomic force microscopy.
J Biotechnol. 2017 Aug 20;256:13-20. doi: 10.1016/j.jbiotec.2017.07.002. Epub 2017 Jul 5.
9
Draft Genome Sequence of the Plant Growth-Promoting Rhizobacterium Pseudomonas fluorescens Strain CREA-C16 Isolated from Pea (Pisum sativum L.) Rhizosphere.
Genome Announc. 2017 Jan 26;5(4):e01456-16. doi: 10.1128/genomeA.01456-16.
10
Characterization of the bacteriocins and the PrtR regulator in a plant-associated Pseudomonas strain.
J Biotechnol. 2020 Jan 10;307:182-192. doi: 10.1016/j.jbiotec.2019.11.003. Epub 2019 Nov 4.
引用本文的文献
1
Exploration of Social Spreading Reveals That This Behavior Is Prevalent among and Pseudomonas fluorescens Isolates and That There Are Variations in the Induction of the Phenotype.
Appl Environ Microbiol. 2021 Sep 10;87(19):e0134421. doi: 10.1128/AEM.01344-21. Epub 2021 Jul 21.
本文引用的文献
1
Characterization of a phage-like pyocin from the plant growth-promoting rhizobacterium Pseudomonas fluorescens SF4c.
Microbiology (Reading). 2012 Jun;158(Pt 6):1493-1503. doi: 10.1099/mic.0.056002-0. Epub 2012 Mar 22.
2
Survival of native Pseudomonas in soil and wheat rhizosphere and antagonist activity against plant pathogenic fungi.
Antonie Van Leeuwenhoek. 2010 Mar;97(3):241-51. doi: 10.1007/s10482-009-9405-9. Epub 2009 Dec 19.
3
Genomics of secondary metabolite production by Pseudomonas spp.
Nat Prod Rep. 2009 Nov;26(11):1408-46. doi: 10.1039/b817075b. Epub 2009 Oct 1.
4
Mobile genetic elements in the genome of the beneficial rhizobacterium Pseudomonas fluorescens Pf-5.
BMC Microbiol. 2009 Jan 13;9:8. doi: 10.1186/1471-2180-9-8.
5
Isolation and identification of rhizoxin analogs from Pseudomonas fluorescens Pf-5 by using a genomic mining strategy.
Appl Environ Microbiol. 2008 May;74(10):3085-93. doi: 10.1128/AEM.02848-07. Epub 2008 Mar 14.
6
A cryptic PKS-NRPS gene locus in the plant commensal Pseudomonas fluorescens Pf-5 codes for the biosynthesis of an antimitotic rhizoxin complex.
Org Biomol Chem. 2007 Jul 21;5(14):2211-3. doi: 10.1039/b707762a. Epub 2007 Jun 18.
7
The genomisotopic approach: a systematic method to isolate products of orphan biosynthetic gene clusters.
Chem Biol. 2007 Jan;14(1):53-63. doi: 10.1016/j.chembiol.2006.11.007.
8
Complete genome sequence of the plant commensal Pseudomonas fluorescens Pf-5.
Nat Biotechnol. 2005 Jul;23(7):873-8. doi: 10.1038/nbt1110. Epub 2005 Jun 26.
9
Characterization of the hcnABC gene cluster encoding hydrogen cyanide synthase and anaerobic regulation by ANR in the strictly aerobic biocontrol agent Pseudomonas fluorescens CHA0.
J Bacteriol. 1998 Jun;180(12):3187-96. doi: 10.1128/JB.180.12.3187-3196.1998.
10
A seven-gene locus for synthesis of phenazine-1-carboxylic acid by Pseudomonas fluorescens 2-79.
J Bacteriol. 1998 May;180(9):2541-8. doi: 10.1128/JB.180.9.2541-2548.1998.
Zotero 插件