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plasmidSPAdes: assembling plasmids from whole genome sequencing data.质粒SPAdes：从全基因组测序数据中组装质粒
Bioinformatics. 2016 Nov 15;32(22):3380-3387. doi: 10.1093/bioinformatics/btw493. Epub 2016 Jul 27.
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In silico detection and typing of plasmids using PlasmidFinder and plasmid multilocus sequence typing.使用质粒查找工具（PlasmidFinder）和质粒多位点序列分型进行质粒的电子检测和分型
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The SEED and the Rapid Annotation of microbial genomes using Subsystems Technology (RAST).SEED 与利用子系统技术进行快速微生物基因组注释（RAST）。
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Legume growth-promoting rhizobia: an overview on the Mesorhizobium genus.豆科促生根瘤菌：中慢生根瘤菌属概述。
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QUAST: quality assessment tool for genome assemblies.QUAST：基因组组装质量评估工具。
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SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing.SPAdes：一种新的基因组组装算法及其在单细胞测序中的应用
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Draft genome sequence of plant growth-promoting rhizobium Mesorhizobium amorphae, isolated from zinc-lead mine tailings.植物促生根瘤菌 Mesorhizobium amorphae 的基因组草图，该菌从锌铅矿尾矿中分离得到。
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Rhizobium sp. strain NGR234 possesses a remarkable number of secretion systems.根瘤菌属的NGR234菌株拥有大量的分泌系统。
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匈牙利中生根瘤菌新种UASWS1009菌株的全基因组序列，一种具有农业和环境应用潜力的资源。

Whole-Genome Sequence of Mesorhizobium hungaricum sp. nov. Strain UASWS1009, a Potential Resource for Agricultural and Environmental Uses.

作者信息

Crovadore Julien, Cochard Bastien, Calmin Gautier, Chablais Romain, Schulz Torsten, Lefort François

机构信息

Plants and Pathogens Group, Research Institute Land Nature and Environment, hepia, HES-SO University of Applied Sciences and Arts Western Switzerland, Jussy, Geneva, Switzerland.

Faculty of Engineering and Architecture, HES-SO University of Applied Sciences and Arts Western Switzerland, Delémont, Switzerland.

出版信息

Genome Announc. 2016 Oct 13;4(5):e01158-16. doi: 10.1128/genomeA.01158-16.

DOI:10.1128/genomeA.01158-16
PMID:27738050
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5064123/
Abstract

We report here the whole-genome shotgun sequences of the strain UASWS1009 of the species Mesorhizobium hungaricum sp. nov., which are different from any other known Mesorhizobium species. This is the first genome registered for this new species, which could be considered as a potential resource for agriculture and environmental uses.

摘要

我们在此报告匈牙利中生根瘤菌新物种UASWS1009菌株的全基因组鸟枪法测序序列，该序列与其他任何已知的中生根瘤菌物种均不同。这是该新物种登记的首个基因组，可被视为农业和环境用途的潜在资源。