• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利：CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法，用中文像聊天一样搜索，搜遍4000万医学文献。AI智能推荐，让科研检索更轻松。

立即免费搜索

文件翻译

保留排版，准确专业，支持PDF/Word/PPT等文件格式，支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述，25分钟生成高质量综述，智能提取关键信息，辅助科研写作。

立即免费体验

黄色海洋假单胞菌菌株UASWS0955的全基因组序列，一种具有农业和环境应用潜力的生物制剂。

Whole-Genome Sequence of Pseudomonas xanthomarina Strain UASWS0955, a Potential Biological Agent for Agricultural and Environmental Uses.

作者信息

Crovadore Julien, Cochard Bastien, Calmin Gautier, Chablais Romain, Schulz Torsten, Lefort François

机构信息

Plants and Pathogens Group, Research Institute Land Nature and Environment, hepia, HES-SO University of Applied Sciences and Arts Western Switzerland, Jussy, Switzerland.

Faculty of Engineering and Architecture, HES-SO University of Applied Sciences and Arts Western Switzerland, Delémont, Switzerland.

出版信息

Genome Announc. 2016 Oct 13;4(5):e01136-16. doi: 10.1128/genomeA.01136-16.

DOI:10.1128/genomeA.01136-16
PMID:27738044
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5064117/
Abstract

We report here the whole-genome shotgun sequence of the strain UASWS0955 of the species Pseudomonas xanthomarina, isolated from sewage sludge. This genome was obtained with an Illumina MiniSeq and is the second genome registered for this species, which is considered as a promising resource for agriculture and bioremediation of contaminated soils.

摘要

我们在此报告从污水污泥中分离出的黄色假单胞菌（Pseudomonas xanthomarina）菌株UASWS0955的全基因组鸟枪法测序序列。该基因组是通过Illumina MiniSeq获得的，是该物种注册的第二个基因组，该物种被认为是农业和污染土壤生物修复的有前景的资源。

相似文献

1
Whole-Genome Sequence of Pseudomonas xanthomarina Strain UASWS0955, a Potential Biological Agent for Agricultural and Environmental Uses.黄色海洋假单胞菌菌株UASWS0955的全基因组序列，一种具有农业和环境应用潜力的生物制剂。
Genome Announc. 2016 Oct 13;4(5):e01136-16. doi: 10.1128/genomeA.01136-16.
2
Whole-Genome Sequence of Pseudomonas graminis Strain UASWS1507, a Potential Biological Control Agent and Biofertilizer Isolated in Switzerland.瑞士分离出的潜在生物防治剂和生物肥料——禾本科假单胞菌菌株UASWS1507的全基因组序列
Genome Announc. 2016 Oct 6;4(5):e01096-16. doi: 10.1128/genomeA.01096-16.
3
Whole-Genome Sequence of Mesorhizobium hungaricum sp. nov. Strain UASWS1009, a Potential Resource for Agricultural and Environmental Uses.匈牙利中生根瘤菌新种UASWS1009菌株的全基因组序列，一种具有农业和环境应用潜力的资源。
Genome Announc. 2016 Oct 13;4(5):e01158-16. doi: 10.1128/genomeA.01158-16.
4
Whole-Genome Sequence of Pseudomonas putida Strain UASWS0946, a Highly Ammonia-Tolerant Nitrifying Bacterium Isolated from Sewage Sludge Aerobic Granules.恶臭假单胞菌菌株UASWS0946的全基因组序列，该菌株是从污水污泥好氧颗粒中分离出的一种高度耐氨的硝化细菌。
Genome Announc. 2015 Oct 8;3(5):e01153-15. doi: 10.1128/genomeA.01153-15.
5
Pseudomonas silesiensis sp. nov. strain A3 isolated from a biological pesticide sewage treatment plant and analysis of the complete genome sequence.从生物农药污水处理厂分离得到的新 Pseudomonas silesiensis 菌株 A3 及其全基因组序列分析。
Syst Appl Microbiol. 2018 Jan;41(1):13-22. doi: 10.1016/j.syapm.2017.09.002. Epub 2017 Nov 3.
6
Bioremediation of oily sludge polluted soil employing a novel strain of Pseudomonas aeruginosa and phytotoxicity of petroleum hydrocarbons for seed germination.利用一株新型铜绿假单胞菌对含油污泥污染土壤进行生物修复及石油烃对种子发芽的植物毒性。
Sci Total Environ. 2020 Oct 1;737:139766. doi: 10.1016/j.scitotenv.2020.139766. Epub 2020 May 29.
7
Isolation and evaluation of potent Pseudomonas species for bioremediation of phorate in amended soil.分离和评价高效假单胞菌物种在改良土壤中对磷胺的生物修复。
Ecotoxicol Environ Saf. 2015 Dec;122:24-30. doi: 10.1016/j.ecoenv.2015.07.007. Epub 2015 Jul 14.
8
Characterization of pyrene degradation by Pseudomonas sp. strain Jpyr-1 isolated from active sewage sludge.从活性污水污泥中分离出的假单胞菌 Jpyr-1 对芘的降解特性。
Bioresour Technol. 2013 Jul;140:15-21. doi: 10.1016/j.biortech.2013.03.184. Epub 2013 Apr 6.
9
Draft Genome Sequence of Bacillus licheniformis Strain UASWS1606, a Plant Biostimulant for Agriculture.地衣芽孢杆菌菌株UASWS1606的基因组序列草图，一种农业用植物生物刺激剂
Microbiol Resour Announc. 2020 Sep 10;9(37):e00740-20. doi: 10.1128/MRA.00740-20.
10
Sewage sludge application as a vehicle for microplastics in eastern Spanish agricultural soils.污水污泥应用作为微塑料在西班牙东部农业土壤中的载体。
Environ Pollut. 2020 Jun;261:114198. doi: 10.1016/j.envpol.2020.114198. Epub 2020 Feb 17.

引用本文的文献

1
Comparative Analysis of Gut Bacterial Community Composition in Two Tropical Economic Sea Cucumbers under Different Seasons of Artificial Environment.人工环境下不同季节两种热带经济海参肠道细菌群落组成的比较分析
Int J Mol Sci. 2024 Apr 22;25(8):4573. doi: 10.3390/ijms25084573.
2
Genotypic characterization of soil bacteria in the Umm Al-Namil Island, Kuwait.科威特乌姆纳米尔岛土壤细菌的基因型特征分析。
Saudi J Biol Sci. 2021 Jul;28(7):3847-3854. doi: 10.1016/j.sjbs.2021.03.060. Epub 2021 Mar 27.
3
Diversity and Genetic Basis for Carbapenem Resistance in a Coastal Marine Environment.沿海海洋环境中碳青霉烯类耐药性的多样性和遗传基础。
Appl Environ Microbiol. 2020 May 5;86(10). doi: 10.1128/AEM.02939-19.
4
Antibiotic Resistant Spp. Spoilers in Fresh Dairy Products: An Underestimated Risk and the Control Strategies.新鲜乳制品中的抗生素抗性菌株：一种被低估的风险及控制策略
Foods. 2019 Sep 1;8(9):372. doi: 10.3390/foods8090372.

本文引用的文献

1
plasmidSPAdes: assembling plasmids from whole genome sequencing data.质粒SPAdes：从全基因组测序数据中组装质粒
Bioinformatics. 2016 Nov 15;32(22):3380-3387. doi: 10.1093/bioinformatics/btw493. Epub 2016 Jul 27.
2
Diversity of endophytic Pseudomonas in Halimione portulacoides from metal(loid)-polluted salt marshes.盐沼植物海蓬子内生假单胞菌的多样性。
Environ Sci Pollut Res Int. 2016 Jul;23(13):13255-67. doi: 10.1007/s11356-016-6483-x. Epub 2016 Mar 29.
3
Constitutive arsenite oxidase expression detected in arsenic-hypertolerant Pseudomonas xanthomarina S11.在耐砷性极强的黄色假单胞菌S11中检测到组成型亚砷酸盐氧化酶表达。
Res Microbiol. 2015 Apr;166(3):205-14. doi: 10.1016/j.resmic.2015.02.010. Epub 2015 Mar 6.
4
Prospecting cold deserts of north western Himalayas for microbial diversity and plant growth promoting attributes.探寻喜马拉雅西北部寒冷沙漠的微生物多样性及促进植物生长的特性。
J Biosci Bioeng. 2015 Jun;119(6):683-93. doi: 10.1016/j.jbiosc.2014.11.006. Epub 2015 Jan 6.
5
Monitoring of oil pollution at Gemsa Bay and bioremediation capacity of bacterial isolates with biosurfactants and nanoparticles.杰姆萨湾石油污染监测以及具有生物表面活性剂和纳米颗粒的细菌分离株的生物修复能力
Mar Pollut Bull. 2014 Oct 15;87(1-2):191-200. doi: 10.1016/j.marpolbul.2014.07.059. Epub 2014 Aug 17.
6
In silico detection and typing of plasmids using PlasmidFinder and plasmid multilocus sequence typing.使用质粒查找工具（PlasmidFinder）和质粒多位点序列分型进行质粒的电子检测和分型
Antimicrob Agents Chemother. 2014 Jul;58(7):3895-903. doi: 10.1128/AAC.02412-14. Epub 2014 Apr 28.
7
The SEED and the Rapid Annotation of microbial genomes using Subsystems Technology (RAST).SEED 与利用子系统技术进行快速微生物基因组注释（RAST）。
Nucleic Acids Res. 2014 Jan;42(Database issue):D206-14. doi: 10.1093/nar/gkt1226. Epub 2013 Nov 29.
8
QUAST: quality assessment tool for genome assemblies.QUAST：基因组组装质量评估工具。
Bioinformatics. 2013 Apr 15;29(8):1072-5. doi: 10.1093/bioinformatics/btt086. Epub 2013 Feb 19.
9
GenBank.GenBank。
Nucleic Acids Res. 2013 Jan;41(Database issue):D36-42. doi: 10.1093/nar/gks1195. Epub 2012 Nov 27.
10
SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing.SPAdes：一种新的基因组组装算法及其在单细胞测序中的应用
J Comput Biol. 2012 May;19(5):455-77. doi: 10.1089/cmb.2012.0021. Epub 2012 Apr 16.