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Protein Sci. 2017 Feb;26(2):218-226. doi: 10.1002/pro.3071. Epub 2016 Nov 4.
2
Spectroscopic and DFT studies of second-sphere variants of the type 1 copper site in azurin: covalent and nonlocal electrostatic contributions to reduction potentials.光谱和密度泛函理论研究天青蛋白中 1 型铜位点的二级结构变体:还原电位的共价和非局部静电贡献。
J Am Chem Soc. 2012 Oct 10;134(40):16701-16. doi: 10.1021/ja306438n. Epub 2012 Oct 2.
3
Copper-sulfenate complex from oxidation of a cavity mutant of Pseudomonas aeruginosa azurin.铜-亚硫酸盐配合物来自铜蓝蛋白空腔突变体的氧化。
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Increasing Reduction Potentials of Type 1 Copper Center and Catalytic Efficiency of Small Laccase from Streptomyces coelicolor through Secondary Coordination Sphere Mutations.通过次级配位圈突变提高Ⅰ型铜中心的还原电势和土曲霉小型漆酶的催化效率。
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J Am Chem Soc. 2014 Sep 3;136(35):12337-44. doi: 10.1021/ja505410u. Epub 2014 Aug 22.
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Prediction of Reduction Potentials of Copper Proteins with Continuum Electrostatics and Density Functional Theory.用连续介质静电学和密度泛函理论预测铜蛋白的还原电位
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Structural Basis for the Effects of Phenylalanine on Tuning the Reduction Potential of Type 1 Copper in Azurin.苯丙氨酸调控蓝铜蛋白中 I 型铜还原电位的结构基础
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Outer-sphere effects on reduction potentials of copper sites in proteins: the curious case of high potential type 2 C112D/M121E Pseudomonas aeruginosa azurin.蛋白质中铜位点还原电位的外球效应:铜绿假单胞菌高电势型 2 C112D/M121E 天青蛋白的奇特情况。
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High-potential states of blue and purple copper proteins.蓝色和紫色铜蛋白的高电位状态。
Biochim Biophys Acta. 1998 Nov 10;1388(2):437-43. doi: 10.1016/s0167-4838(98)00205-2.
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Role of ligand substitution on long-range electron transfer in azurins.配体取代在天青蛋白远程电子转移中的作用。
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引用本文的文献

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Circular permutation at azurin's active site slows down its folding.活性部位的环状排列使天青蛋白的折叠速度减慢。
J Biol Inorg Chem. 2023 Dec;28(8):737-749. doi: 10.1007/s00775-023-02023-z. Epub 2023 Nov 13.
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Cu-based chimeric T1 copper sites allow for independent modulation of reorganization energy and reduction potential.基于铜的嵌合T1铜位点允许对重组能和还原电位进行独立调节。
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Two Tryptophans Are Better Than One in Accelerating Electron Flow through a Protein.两个色氨酸在加速电子通过蛋白质方面比一个更好。
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Investigating the Effect of Chain Connectivity on the Folding of a Beta-Sheet Protein On and Off the Ribosome.研究链连接性对核糖体上和核糖体外β-折叠蛋白折叠的影响。
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Clarifying the Copper Coordination Environment in a de Novo Designed Red Copper Protein.阐明从头设计的红色铜蛋白中的铜配位环境。
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本文引用的文献

1
Design of a single protein that spans the entire 2-V range of physiological redox potentials.一种跨越生理氧化还原电位整个2伏范围的单一蛋白质的设计。
Proc Natl Acad Sci U S A. 2016 Jan 12;113(2):262-7. doi: 10.1073/pnas.1515897112. Epub 2015 Dec 2.
2
Long-Range Electron Transfer in Engineered Azurins Exhibits Marcus Inverted Region Behavior.工程改造的蓝铜蛋白中的长程电子转移表现出马库斯反转区域行为。
J Phys Chem Lett. 2015 Jan 2;6(1):100-5. doi: 10.1021/jz5022685. Epub 2014 Dec 17.
3
Metalloproteins containing cytochrome, iron-sulfur, or copper redox centers.含有细胞色素、铁硫或铜氧化还原中心的金属蛋白。
Chem Rev. 2014 Apr 23;114(8):4366-469. doi: 10.1021/cr400479b.
4
Modulating the Copper-Sulfur Interaction in Type 1 Blue Copper Azurin by Replacing Cys112 with Nonproteinogenic Homocysteine.通过用非蛋白质源性同型半胱氨酸取代Cys112来调节1型蓝铜天青蛋白中的铜 - 硫相互作用。
Inorg Chem Front. 2014 Feb 1;1(2):153-158. doi: 10.1039/C3QI00096F.
5
Inner- and outer-sphere metal coordination in blue copper proteins.蓝铜蛋白中的内、外球金属配位。
J Inorg Biochem. 2012 Oct;115:119-26. doi: 10.1016/j.jinorgbio.2012.05.002. Epub 2012 May 9.
6
Probing the reactivity of different forms of azurin by flavin photoreduction.通过黄素光还原探测不同形式细胞色素 c 的反应活性。
FEBS J. 2011 May;278(9):1506-21. doi: 10.1111/j.1742-4658.2011.08067.x. Epub 2011 Mar 22.
7
Cupredoxins--a study of how proteins may evolve to use metals for bioenergetic processes.铜氧还蛋白——研究蛋白质如何进化以利用金属进行生物能量过程。
Metallomics. 2011 Feb;3(2):140-51. doi: 10.1039/c0mt00061b. Epub 2011 Jan 24.
8
Incorporation of the red copper nitrosocyanin binding loop into blue copper azurin.将红色亚铜硝酰氰配合物结合环整合到蓝色铜蓝蛋白中。
J Biol Inorg Chem. 2011 Mar;16(3):473-80. doi: 10.1007/s00775-010-0746-7. Epub 2010 Dec 14.
9
Transforming a blue copper into a red copper protein: engineering cysteine and homocysteine into the axial position of azurin using site-directed mutagenesis and expressed protein ligation.将蓝铜蛋白转化为红铜蛋白:使用定点突变和表达蛋白连接技术将半胱氨酸和高半胱氨酸工程改造到蓝铜蛋白的轴向位置。
J Am Chem Soc. 2010 Jul 28;132(29):10093-101. doi: 10.1021/ja102632p.
10
Type-zero copper proteins.零型铜蛋白。
Nat Chem. 2009 Dec;1(9):711-5. doi: 10.1038/nchem.412.

环排列对天青蛋白中1型蓝色铜中心结构和功能的影响。

Effect of circular permutation on the structure and function of type 1 blue copper center in azurin.

作者信息

Yu Yang, Petrik Igor D, Chacón Kelly N, Hosseinzadeh Parisa, Chen Honghui, Blackburn Ninian J, Lu Yi

机构信息

Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, 300308, China.

Department of Chemistry, University of Illinois at Urbana-Champaign, Urbana, Illinois, 61801.

出版信息

Protein Sci. 2017 Feb;26(2):218-226. doi: 10.1002/pro.3071. Epub 2016 Nov 4.

DOI:10.1002/pro.3071
PMID:27759897
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5275729/
Abstract

Type 1 copper (T1Cu) proteins are electron transfer (ET) proteins involved in many important biological processes. While the effects of changing primary and secondary coordination spheres in the T1Cu ET function have been extensively studied, few report has explored the effect of the overall protein structural perturbation on active site configuration or reduction potential of the protein, even though the protein scaffold has been proposed to play a critical role in enforcing the entatic or "rack-induced" state for ET functions. We herein report circular permutation of azurin by linking the N- and C-termini and creating new termini in the loops between 1 and 2 β strands or between 3 and 4 β strands. Characterization by electronic absorption, electron paramagnetic spectroscopies, as well as crystallography and cyclic voltammetry revealed that, while the overall structure and the primary coordination sphere of the circular permutated azurins remain the same as those of native azurin, their reduction potentials increased by 18 and 124 mV over that of WTAz. Such increases in reduction potentials can be attributed to subtle differences in the hydrogen-bonding network in secondary coordination sphere around the T1Cu center.

摘要

1型铜(T1Cu)蛋白是参与许多重要生物过程的电子传递(ET)蛋白。虽然在T1Cu电子传递功能中改变一级和二级配位球的影响已得到广泛研究,但很少有报告探讨整体蛋白质结构扰动对蛋白质活性位点构型或还原电位的影响,尽管有人提出蛋白质支架在维持ET功能的内禀态或“支架诱导”状态方面起着关键作用。我们在此报告通过连接N端和C端并在1和2条β链之间或3和4条β链之间的环中创建新的末端来对天青蛋白进行环形排列。通过电子吸收、电子顺磁共振光谱以及晶体学和循环伏安法进行表征发现,虽然环形排列的天青蛋白的整体结构和一级配位球与天然天青蛋白相同,但其还原电位比野生型天青蛋白(WTAz)分别增加了18和124 mV。还原电位的这种增加可归因于T1Cu中心周围二级配位球中氢键网络的细微差异。