Yu Yang, Petrik Igor D, Chacón Kelly N, Hosseinzadeh Parisa, Chen Honghui, Blackburn Ninian J, Lu Yi
Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, 300308, China.
Department of Chemistry, University of Illinois at Urbana-Champaign, Urbana, Illinois, 61801.
Protein Sci. 2017 Feb;26(2):218-226. doi: 10.1002/pro.3071. Epub 2016 Nov 4.
Type 1 copper (T1Cu) proteins are electron transfer (ET) proteins involved in many important biological processes. While the effects of changing primary and secondary coordination spheres in the T1Cu ET function have been extensively studied, few report has explored the effect of the overall protein structural perturbation on active site configuration or reduction potential of the protein, even though the protein scaffold has been proposed to play a critical role in enforcing the entatic or "rack-induced" state for ET functions. We herein report circular permutation of azurin by linking the N- and C-termini and creating new termini in the loops between 1 and 2 β strands or between 3 and 4 β strands. Characterization by electronic absorption, electron paramagnetic spectroscopies, as well as crystallography and cyclic voltammetry revealed that, while the overall structure and the primary coordination sphere of the circular permutated azurins remain the same as those of native azurin, their reduction potentials increased by 18 and 124 mV over that of WTAz. Such increases in reduction potentials can be attributed to subtle differences in the hydrogen-bonding network in secondary coordination sphere around the T1Cu center.
1型铜(T1Cu)蛋白是参与许多重要生物过程的电子传递(ET)蛋白。虽然在T1Cu电子传递功能中改变一级和二级配位球的影响已得到广泛研究,但很少有报告探讨整体蛋白质结构扰动对蛋白质活性位点构型或还原电位的影响,尽管有人提出蛋白质支架在维持ET功能的内禀态或“支架诱导”状态方面起着关键作用。我们在此报告通过连接N端和C端并在1和2条β链之间或3和4条β链之间的环中创建新的末端来对天青蛋白进行环形排列。通过电子吸收、电子顺磁共振光谱以及晶体学和循环伏安法进行表征发现,虽然环形排列的天青蛋白的整体结构和一级配位球与天然天青蛋白相同,但其还原电位比野生型天青蛋白(WTAz)分别增加了18和124 mV。还原电位的这种增加可归因于T1Cu中心周围二级配位球中氢键网络的细微差异。