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基于Globalfiler® 短串联重复序列的北美原住民的基因结构。

The genetic structure of native Americans in North America based on the Globalfiler® STRs.

作者信息

McCulloh Kelly L, Ng Jillian, Oldt Robert F, Weise Jessica A, Viray Joy, Budowle Bruce, Glenn Smith David, Kanthaswamy Sreetharan

机构信息

Forensic Science Graduate Program, University of California, One Shields Avenue, Davis, CA 95616, USA.

Molecular Anthropology Laboratory, Department of Anthropology, University of California, One Shields Avenue, Davis, CA 95616, USA.

出版信息

Leg Med (Tokyo). 2016 Nov;23:49-54. doi: 10.1016/j.legalmed.2016.09.007. Epub 2016 Sep 23.

Abstract

Current forensic STR databases, such as CODIS, lack population genetic data on Native American populations. Information from a geographically diverse array of tribes is necessary to provide improved statistical estimates of the strength of associations with DNA evidence. The Globalfiler® STR markers were used to characterize the genetic structure of ten tribal populations from seven geographic regions in North America, including those not presently represented in forensic databases. Samples from the Arctic region, Baja California, California/Great Basin, the Southeast, Mexico, the Midwest, and the Southwest were analyzed for allele frequencies, observed and expected heterozygosities, and F-statistics. The tribal samples exhibited an F or θ value above the conservative 0.03 estimate recommended by the National Research Council (NRC) for calculating random match probabilities among Native Americans. The greater differentiation among tribal populations computed here (θ=0.04) warrants the inclusion of additional regional Native American samples into STR databases.

摘要

当前的法医STR数据库,如联合DNA索引系统(CODIS),缺乏美洲原住民群体的群体遗传数据。需要来自地理分布多样的一系列部落的信息,以改进对与DNA证据关联强度的统计估计。Globalfiler® STR标记用于表征来自北美七个地理区域的十个部落群体的遗传结构,包括目前法医数据库中未涵盖的群体。分析了来自北极地区、下加利福尼亚、加利福尼亚/大盆地、东南部、墨西哥、中西部和西南部的样本的等位基因频率、观察到的和预期的杂合度以及F统计量。部落样本的F或θ值高于美国国家研究委员会(NRC)推荐的用于计算美洲原住民之间随机匹配概率的保守估计值0.03。此处计算出的部落群体之间更大的分化程度(θ = 0.04)表明有必要将更多区域的美洲原住民样本纳入STR数据库。

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