Periwal Vinita, Scaria Vinod
GN Ramachandran Knowledge Center for Genome Informatics, CSIR Institute of Genomics and Integrative Biology, Mall Road, Delhi, 110007, India.
Methods Mol Biol. 2017;1517:155-168. doi: 10.1007/978-1-4939-6563-2_11.
The ubiquitous role of microRNAs (miRNAs) in a number of pathological processes has suggested that they could act as potential drug targets. RNA-binding small molecules offer an attractive means for modulating miRNA function. The availability of bioassay data sets for a variety of biological assays and molecules in public domain provides a new opportunity toward utilizing them to create models and further utilize them for in silico virtual screening approaches to prioritize or assign potential functions for small molecules. Here, we describe a computational strategy based on machine learning for creation of predictive models from high-throughput biological screens for virtual screening of small molecules with the potential to inhibit microRNAs. Such models could be potentially used for computational prioritization of small molecules before performing high-throughput biological assay.
微小RNA(miRNA)在许多病理过程中普遍存在的作用表明,它们可能作为潜在的药物靶点。RNA结合小分子为调节miRNA功能提供了一种有吸引力的手段。公共领域中各种生物测定和分子的生物测定数据集的可用性为利用它们创建模型并进一步将其用于计算机虚拟筛选方法以对小分子的潜在功能进行优先级排序或分配提供了新机会。在这里,我们描述了一种基于机器学习的计算策略,用于从高通量生物筛选中创建预测模型,以虚拟筛选具有抑制微小RNA潜力的小分子。此类模型可潜在地用于在进行高通量生物测定之前对小分子进行计算优先级排序。