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血液学研究的生物数据库

Biological Databases for Hematology Research.

作者信息

Zhang Qian, Ding Nan, Zhang Lu, Zhao Xuetong, Yang Yadong, Qu Hongzhu, Fang Xiangdong

机构信息

CAS Key Laboratory of Genome Sciences and Information, Beijing Institute of Genomics, Chinese Academy of Sciences, Beijing 100101, China.

CAS Key Laboratory of Genome Sciences and Information, Beijing Institute of Genomics, Chinese Academy of Sciences, Beijing 100101, China; University of Chinese Academy of Sciences, Beijing 100049, China.

出版信息

Genomics Proteomics Bioinformatics. 2016 Dec;14(6):333-337. doi: 10.1016/j.gpb.2016.10.004. Epub 2016 Dec 11.

DOI:10.1016/j.gpb.2016.10.004
PMID:27965103
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5200935/
Abstract

With the advances of genome-wide sequencing technologies and bioinformatics approaches, a large number of datasets of normal and malignant erythropoiesis have been generated and made public to researchers around the world. Collection and integration of these datasets greatly facilitate basic research and clinical diagnosis and treatment of blood disorders. Here we provide a brief introduction of the most popular omics data resources of normal and malignant hematopoiesis, including some integrated web tools, to help users get better equipped to perform common analyses. We hope this review will promote the awareness and facilitate the usage of public database resources in the hematology research.

摘要

随着全基因组测序技术和生物信息学方法的进步,已经产生了大量正常和恶性红细胞生成的数据集,并向世界各地的研究人员公开。这些数据集的收集和整合极大地促进了血液疾病的基础研究以及临床诊断和治疗。在这里,我们简要介绍正常和恶性造血最常用的组学数据资源,包括一些集成网络工具,以帮助用户更好地进行常见分析。我们希望这篇综述能提高人们对血液学研究中公共数据库资源的认识,并促进其使用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1d5f/5200935/9eb0451c097b/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1d5f/5200935/9eb0451c097b/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1d5f/5200935/9eb0451c097b/gr1.jpg

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The Effect of Low Doses of Zearalenone (ZEN) on the Bone Marrow Microenvironment and Haematological Parameters of Blood Plasma in Pre-Pubertal Gilts.低剂量玉米赤霉烯酮(ZEN)对未成年母猪骨髓微环境和血浆血液学参数的影响。
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本文引用的文献

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Tracing haematopoietic stem cell formation at single-cell resolution.单细胞分辨率追踪造血干细胞的形成。
Nature. 2016 May 26;533(7604):487-92. doi: 10.1038/nature17997. Epub 2016 May 18.
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BloodSpot: a database of gene expression profiles and transcriptional programs for healthy and malignant haematopoiesis.
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European LeukemiaNet recommendations for the management of chronic myeloid leukemia: 2013.欧洲白血病网络关于慢性髓性白血病管理的建议:2013 年版。
Blood. 2013 Aug 8;122(6):872-84. doi: 10.1182/blood-2013-05-501569. Epub 2013 Jun 26.
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Ontogeny of erythroid gene expression.红细胞基因表达的个体发生。
Blood. 2013 Feb 7;121(6):e5-e13. doi: 10.1182/blood-2012-04-422394. Epub 2012 Dec 12.
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HemaExplorer: a database of mRNA expression profiles in normal and malignant haematopoiesis.HemaExplorer:正常和恶性造血中 mRNA 表达谱的数据库。
Nucleic Acids Res. 2013 Jan;41(Database issue):D1034-9. doi: 10.1093/nar/gks1021. Epub 2012 Nov 9.
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Molecular mechanisms of pathology and treatment in Diamond Blackfan Anaemia.Diamond Blackfan 贫血症的病理学和治疗的分子机制。
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