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法医学中的微生物土壤群落分析:在盲测中的应用。

Microbial soil community analyses for forensic science: Application to a blind test.

作者信息

Demanèche Sandrine, Schauser Leif, Dawson Lorna, Franqueville Laure, Simonet Pascal

机构信息

Université de Lyon, École Centrale de Lyon, Laboratoire Ampère (CNRS UMR5005), Environmental Microbial Genomics, Ecully, France.

QIAGEN Aarhus A/S, Silkeborgvej 2, DK-8000 Aarhus, Denmark.

出版信息

Forensic Sci Int. 2017 Jan;270:153-158. doi: 10.1016/j.forsciint.2016.12.004. Epub 2016 Dec 9.

Abstract

Soil complexity, heterogeneity and transferability make it valuable in forensic investigations to help obtain clues as to the origin of an unknown sample, or to compare samples from a suspect or object with samples collected at a crime scene. In a few countries, soil analysis is used in matters from site verification to estimates of time after death. However, up to date the application or use of soil information in criminal investigations has been limited. In particular, comparing bacterial communities in soil samples could be a useful tool for forensic science. To evaluate the relevance of this approach, a blind test was performed to determine the origin of two questioned samples (one from the mock crime scene and the other from a 50:50 mixture of the crime scene and the alibi site) compared to three control samples (soil samples from the crime scene, from a context site 25m away from the crime scene and from the alibi site which was the suspect's home). Two biological methods were used, Ribosomal Intergenic Spacer Analysis (RISA), and 16S rRNA gene sequencing with Illumina Miseq, to evaluate the discriminating power of soil bacterial communities. Both techniques discriminated well between soils from a single source, but a combination of both techniques was necessary to show that the origin was a mixture of soils. This study illustrates the potential of applying microbial ecology methodologies in soil as an evaluative forensic tool.

摘要

土壤的复杂性、异质性和可转移性使其在法医调查中具有重要价值,有助于获取有关未知样本来源的线索,或将嫌疑人或物体上的样本与在犯罪现场采集的样本进行比较。在一些国家,土壤分析被用于从现场核实到死后时间估计等事务。然而,迄今为止,土壤信息在刑事调查中的应用一直有限。特别是,比较土壤样本中的细菌群落可能是法医学的一个有用工具。为了评估这种方法的相关性,进行了一项盲测,以确定两个可疑样本(一个来自模拟犯罪现场,另一个来自犯罪现场和不在场证明地点的50:50混合物)相对于三个对照样本(来自犯罪现场、距离犯罪现场25米的背景地点以及作为嫌疑人住所的不在场证明地点的土壤样本)的来源。使用了两种生物学方法,核糖体基因间隔区分析(RISA)和基于Illumina Miseq的16S rRNA基因测序,以评估土壤细菌群落的鉴别能力。两种技术都能很好地区分单一来源的土壤,但需要两种技术结合才能表明来源是土壤混合物。这项研究说明了将微生物生态学方法应用于土壤作为一种评估性法医工具的潜力。

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