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Mosaic ratio quantification of isochromosome 12p in Pallister-Killian syndrome using droplet digital PCR.使用液滴数字PCR对帕利斯特-基利安综合征中12号等臂染色体的嵌合比例进行定量分析。
Mol Genet Genomic Med. 2016 Jan 20;4(3):257-61. doi: 10.1002/mgg3.200. eCollection 2016 May.
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Somatic Activating Mutations in GNAQ and GNA11 Are Associated with Congenital Hemangioma.GNAQ和GNA11中的体细胞激活突变与先天性血管瘤相关。
Am J Hum Genet. 2016 Apr 7;98(4):789-95. doi: 10.1016/j.ajhg.2016.03.009.
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Copy Number Variations in the Survival Motor Neuron Genes: Implications for Spinal Muscular Atrophy and Other Neurodegenerative Diseases.生存运动神经元基因的拷贝数变异:对脊髓性肌萎缩症和其他神经退行性疾病的影响。
Front Mol Biosci. 2016 Mar 10;3:7. doi: 10.3389/fmolb.2016.00007. eCollection 2016.
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Ultra-sensitive droplet digital PCR for detecting a low-prevalence somatic GNAQ mutation in Sturge-Weber syndrome.用于检测斯特奇-韦伯综合征中低流行率体细胞GNAQ突变的超灵敏液滴数字PCR
Sci Rep. 2016 Mar 9;6:22985. doi: 10.1038/srep22985.
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Droplet digital PCR combined with minisequencing, a new approach to analyze fetal DNA from maternal blood: application to the non-invasive prenatal diagnosis of achondroplasia.液滴数字PCR结合微测序:一种从母血中分析胎儿DNA的新方法——应用于软骨发育不全的无创产前诊断
Prenat Diagn. 2016 May;36(5):397-406. doi: 10.1002/pd.4790. Epub 2016 Apr 7.
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Somatic Mutation Allelic Ratio Test Using ddPCR (SMART-ddPCR): An Accurate Method for Assessment of Preferential Allelic Imbalance in Tumor DNA.使用数字 droplet 聚合酶链反应(ddPCR)的体细胞突变等位基因比率测试(SMART-ddPCR):一种评估肿瘤 DNA 中优先等位基因不平衡的准确方法。
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数字PCR在儿童期遗传性疾病研究中的适用性。

Applicability of digital PCR to the investigation of pediatric-onset genetic disorders.

作者信息

Butchbach Matthew E R

机构信息

Center for Applied Clinical Genomics, Nemours Biomedical Research, Nemours Alfred I. duPont Hospital for Children, Wilmington, DE, USA; Center for Pediatric Research, Nemours Biomedical Research, Nemours Alfred I. duPont Hospital for Children, Wilmington, DE, USA; Department of Biological Sciences, University of Delaware, Newark, DE, USA; Department of Pediatrics, Thomas Jefferson University, Philadelphia, PA, USA.

出版信息

Biomol Detect Quantif. 2016 Aug 8;10:9-14. doi: 10.1016/j.bdq.2016.06.002. eCollection 2016 Dec.

DOI:10.1016/j.bdq.2016.06.002
PMID:27990344
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5154671/
Abstract

Early-onset rare diseases have a strong impact on child healthcare even though the incidence of each of these diseases is relatively low. In order to better manage the care of these children, it is imperative to quickly diagnose the molecular bases for these disorders as well as to develop technologies with prognostic potential. Digital PCR (dPCR) is well suited for this role by providing an absolute quantification of the target DNA within a sample. This review illustrates how dPCR can be used to identify genes associated with pediatric-onset disorders, to identify copy number status of important disease-causing genes and variants and to quantify modifier genes. It is also a powerful technology to track changes in genomic biomarkers with disease progression. Based on its capability to accurately and reliably detect genomic alterations with high sensitivity and a large dynamic detection range, dPCR has the potential to become the tool of choice for the verification of pediatric disease-associated mutations identified by next generation sequencing, copy number determination and noninvasive prenatal screening.

摘要

早发性罕见疾病对儿童医疗保健有重大影响,尽管这些疾病各自的发病率相对较低。为了更好地管理对这些儿童的护理,迅速诊断这些疾病的分子基础以及开发具有预后潜力的技术势在必行。数字PCR(dPCR)通过对样品中的目标DNA进行绝对定量,非常适合这一角色。本综述阐述了dPCR如何用于鉴定与儿童期发病疾病相关的基因、确定重要致病基因和变体的拷贝数状态以及对修饰基因进行定量。它也是一种强大的技术,可跟踪随着疾病进展基因组生物标志物的变化。基于其能够以高灵敏度和大动态检测范围准确可靠地检测基因组改变的能力,dPCR有潜力成为验证通过下一代测序、拷贝数测定和无创产前筛查鉴定出的儿童疾病相关突变的首选工具。