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干扰增加海洋沉积物中的微生物群落多样性和生产力。

Disturbance Increases Microbial Community Diversity and Production in Marine Sediments.

作者信息

Galand Pierre E, Lucas Sabrina, Fagervold Sonja K, Peru Erwan, Pruski Audrey M, Vétion Gilles, Dupuy Christine, Guizien Katell

机构信息

Sorbonne Universités, UPMC Univ Paris 06, CNRS, Laboratoire d'Ecogéochimie des Environnements Benthiques (LECOB), Observatoire Océanologique Banyuls sur Mer, France.

UMR 7266 Littoral, Environnement et Sociétés, Institut du littoral et de l'environnement, CNRS - Université de La Rochelle La Rochelle, France.

出版信息

Front Microbiol. 2016 Dec 2;7:1950. doi: 10.3389/fmicb.2016.01950. eCollection 2016.

Abstract

Disturbance strongly impacts patterns of community diversity, yet the shape of the diversity-disturbance relationship remains a matter of debate. The topic has been of interest in theoretical ecology for decades as it has practical implications for the understanding of ecosystem services in nature. One of these processes is the remineralization of organic matter by microorganisms in coastal marine sediments, which are periodically impacted by disturbances across the sediment-water interface. Here we set up an experiment to test the hypothesis that disturbance impacts microbial diversity and function during the anaerobic degradation of organic matter in coastal sediments. We show that during the first 3 weeks of the experiment, disturbance increased both microbial production, derived from the increase in microbial abundance, and diversity of the active fraction of the community. Both community diversity and phylogenetic diversity increased, which suggests that disturbance promoted the cohabitation of ecologically different microorganisms. Metagenome analysis also showed that disturbance increased the relative abundance of genes diagnostic of metabolism associated with the sequential anaerobic degradation of organic matter. However, community composition was not impacted in a systematic way and changed over time. In nature, we can hypothesize that moderate storm disturbances, which impact coastal sediments, promote diverse, and productive communities. These events, rather than altering the decomposition of organic matter, may increase the substrate turnover and, ultimately, remineralization rates.

摘要

干扰对群落多样性模式有强烈影响,然而多样性与干扰关系的形态仍存在争议。几十年来,该话题在理论生态学中一直备受关注,因为它对理解自然生态系统服务具有实际意义。其中一个过程是沿海海洋沉积物中微生物对有机物的再矿化作用,沉积物 - 水界面会周期性受到干扰的影响。在此,我们开展了一项实验,以检验干扰在沿海沉积物中有机物厌氧降解过程中影响微生物多样性和功能这一假设。我们发现,在实验的前三周,干扰使微生物产量增加(源于微生物丰度的增加),同时也使群落活性部分的多样性增加。群落多样性和系统发育多样性均增加,这表明干扰促进了生态上不同的微生物共存。宏基因组分析还表明,干扰增加了与有机物顺序厌氧降解相关的代谢诊断基因的相对丰度。然而,群落组成并未受到系统性影响,而是随时间变化。在自然环境中,我们可以推测,影响沿海沉积物的适度风暴干扰会促进多样化且高产的群落形成。这些事件并非改变有机物的分解,而是可能增加底物周转,最终提高再矿化速率。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bf6a/5133735/da06bc829574/fmicb-07-01950-g001.jpg

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