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斯里兰卡干旱地区有毒和无毒蓝藻之间的遗传差异。

Genetic divergence among toxic and non-toxic cyanobacteria of the dry zone of Sri Lanka.

作者信息

Liyanage Harshini M, Magana Arachchi Dhammika N, Chandrasekaran Naduviladath V

机构信息

National Institute of Fundamental Studies (NIFS), Hantana Road, Kandy, 20000 Sri Lanka.

Department of Chemistry, University of Colombo, Colombo 3, 00300 Sri Lanka.

出版信息

Springerplus. 2016 Nov 28;5(1):2026. doi: 10.1186/s40064-016-3680-5. eCollection 2016.

Abstract

Sri Lanka has rich cyanobacterial diversity, however, only few studies have been conducted to identify the potential toxin producers in water bodies used for human consumption. As the detection of cyanotoxin is vital in water quality management, a study was done by employing 16S rRNA gene to explore the genetic divergence, phylogenetic relationships and potential toxin producing cyanobacteria in reservoirs and well waters in the dry zone of Sri Lanka. Forty five, 16S rRNA gene sequences were assayed and phylogenetic tree was constructed. Among 45 isolates, 20 isolates were classified as unidentified cyanobacteria and considered as novel cyanobacterial genera. Of 25 identified isolates, seven isolates were identified up to species level. With 16S rRNA phylogeny, 20 unidentified cyanobacterial isolates were able to place on their taxonomic positions up to order level. Results revealed that water samples understudy had vast cyanobacterial diversity with potential microcystin (MC) and cylindrospermopsin (CYN) producers and eleven clusters clearly demonstrated five cyanobacterial orders with more than 90% similarity irrespective to their toxicity which showed the suitability of 16S rRNA gene for taxonomic differentiation. Sixteen isolates had the potential to produce MC and two isolates to produce CYN. Findings of the study confirm the rich cyanobacterial diversity and the divergence among the potential cyanotoxin producers in the dry zone water bodies of Sri Lanka.

摘要

斯里兰卡拥有丰富的蓝藻多样性,然而,仅有少数研究致力于鉴定供人类饮用的水体中的潜在毒素产生菌。由于蓝藻毒素的检测在水质管理中至关重要,因此开展了一项研究,采用16S rRNA基因来探究斯里兰卡干旱地区水库和井水的遗传差异、系统发育关系以及潜在的产毒素蓝藻。对45个16S rRNA基因序列进行了分析,并构建了系统发育树。在45个分离株中,20个分离株被归类为未鉴定的蓝藻,被视为新的蓝藻属。在25个已鉴定的分离株中,7个分离株被鉴定到种水平。通过16S rRNA系统发育分析,20个未鉴定的蓝藻分离株能够在分类地位上确定到目水平。结果显示,所研究的水样具有丰富的蓝藻多样性,存在潜在的微囊藻毒素(MC)和柱孢藻毒素(CYN)产生菌,11个聚类清晰地展示了5个蓝藻目,相似度超过90%,与它们的毒性无关,这表明16S rRNA基因适用于分类鉴别。16个分离株有产生MC的潜力,2个分离株有产生CYN的潜力。该研究结果证实了斯里兰卡干旱地区水体中丰富的蓝藻多样性以及潜在蓝藻毒素产生菌之间的差异。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f270/5125326/367b617f3b02/40064_2016_3680_Fig1_HTML.jpg

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