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关于蝗虫粪便微生物微生物组的蛋白质组数据。

Proteome data on the microbial microbiome of grasshopper feces.

作者信息

Jehmlich Nico, Müller Martina, Meyer Stefanie, Tischer Alexander, Potthast Karin, Michalzik Beate, von Bergen Martin

机构信息

Department of Molecular Systems Biology, Helmholtz Centre for Environmental Research - UFZ, Permoserstr. 15, 04318 Leipzig, Germany.

Institut für Geographie Professur Physische Geographie/Schwerpunkt Bodenkunde, Löbdergraben 32, 07743 Jena, Germany.

出版信息

Data Brief. 2016 Nov 16;9:1147-1154. doi: 10.1016/j.dib.2016.11.033. eCollection 2016 Dec.

DOI:10.1016/j.dib.2016.11.033
PMID:27995170
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5153450/
Abstract

We present proteome data from the microbiota (feces) after a diet shift from a natural diverse to a monocultural meadow with The abundant grasshopper species, was taken from the wild and kept in captivity and were fed with for five days. For phytophagous insects, the efficiency of utilization of hemicellulose and cellulose depends on the gut microbiota. Shifts in environmental and management conditions alter the presence and abundance of plant species which may induce adaptations in the diversity of gut microbiota. The mass spectrometry proteomics data have been deposited to the ProteomeXchange Consortium via the PRIDE partner repository with the dataset identifier PXD005126.

摘要

我们展示了饮食从天然多样化转变为单一栽培草地后微生物群(粪便)的蛋白质组数据。丰富的蝗虫物种从野外捕获并圈养,喂食五天。对于植食性昆虫,半纤维素和纤维素的利用效率取决于肠道微生物群。环境和管理条件的变化会改变植物物种的存在和丰度,这可能会促使肠道微生物群多样性发生适应性变化。质谱蛋白质组学数据已通过PRIDE合作伙伴存储库存入蛋白质组交换联盟,数据集标识符为PXD005126。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a26f/5153450/4081779b6853/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a26f/5153450/4a90c4970e51/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a26f/5153450/6f1c6759a97c/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a26f/5153450/e3a9d1c5c522/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a26f/5153450/7e0720234e73/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a26f/5153450/4081779b6853/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a26f/5153450/4a90c4970e51/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a26f/5153450/6f1c6759a97c/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a26f/5153450/e3a9d1c5c522/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a26f/5153450/7e0720234e73/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a26f/5153450/4081779b6853/gr5.jpg

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引用本文的文献

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本文引用的文献

1
In situ protein-SIP highlights Burkholderiaceae as key players degrading toluene by para ring hydroxylation in a constructed wetland model.原位蛋白质-SIP表明伯克霍尔德氏菌科是人工湿地模型中通过对环羟基化降解甲苯的关键微生物。
Environ Microbiol. 2016 Apr;18(4):1176-86. doi: 10.1111/1462-2920.13133. Epub 2016 Jan 18.
2
ProteomeXchange provides globally coordinated proteomics data submission and dissemination.蛋白质组学交换库提供全球协调的蛋白质组学数据提交和传播服务。
Nat Biotechnol. 2014 Mar;32(3):223-6. doi: 10.1038/nbt.2839.
3
Incorporation of carbon and nitrogen atoms into proteins measured by protein-based stable isotope probing (Protein-SIP).
通过基于蛋白质的稳定同位素探测(Protein-SIP)测量碳和氮原子掺入蛋白质的情况。
Rapid Commun Mass Spectrom. 2008 Sep;22(18):2889-97. doi: 10.1002/rcm.3684.